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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5uvgA_

Fold library idPDB HeaderMoleculeTitle
c5uvgA_1.85PDB header: hydrolaseChain: A: PDB Molecule: sphingomyelin phosphodiesterase 3,sphingomyelin


Added to library: Sat Jul 1 08:29:03 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKSFCFATANVCLLPDSLARVNNLFNTQARAKEIGQRIRNGAARPQIKIYIDSPHPDEAFDHEVSAFFPA
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Known secondary structure (DSSP)


GGGS
SS
SS
S






SS

TTSSSSS

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLDFLCLQEVFDKRAATKLKEQLHGYFEYILYDVGVYGCLNSGLLFASRYPIMDVAYHCYPNKCNDDALA
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Known secondary structure (DSSP) T



TTT
S

GGGG






SS




STT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKGALFLKVQVGSTPQDQRIVGYIACTHLHAPQEDSAIRCGQLDLLQDWLADFRKSTSSPEELVAFDVVC
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Known secondary structure (DSSP)


TTS




TT
TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence GDFNFDNCSSDDKLEQQHSLFTHYRDPCRLGPGEEKPWAIGTLLDTNDVCTPDNLQKVLESEEGRREYLA
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Known secondary structure (DSSP)
S

SS
GGGT
T
TTTT
TT



BB






TSB
 .........290.........300.........310.........320.........330.........340........
Sequence FPTSKSSGQKGRKELLKGNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVSSG
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Known secondary structure (DSSP)

TTTT

GGG

SS



SSSS
TT
TTTTT
SB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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