PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5uivA_

Fold library id	PDB Header	Molecule	Title
c5uivA_	2.45	PDB header: transferase	Chain: A: PDB Molecule: bifunctional thymidylate/uridylate kinase;

Links to external resources
Added to library: Sat Aug 12 08:28:24 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T S A R G Q L I L I E G L D R S G K S T Q A S I L S T K L S P S K L I K F P D R S T P I G K L I N E Y L T N K S F T L S D Q A A H L L F S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S T T S S S S S S S
T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N R W E L S Q Q I Q D L L N Q G Y F I I L D R Y I Y S G I A Y T L A K N D F H D E T I S Q G K N K Q Q L N N I D W L L S P D K G L P K P D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
G G G G
B T T T B
S S
T T T T
G G G T T S B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T L F L T L D L E E I S K R K G W G D E R Y E L Q Q F Q A K V K Q C F L E I L D T N K D P T I R I V D V G G K T I D Q V T T Q L W E I I E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
T T
T T T
T T
T T

. . . . . . . . . 220 . . . . .

Sequence N K N H E L I N D S I Q F I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
B
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	S	A	R	G	Q	L	I	L	I	E	G	L	D	R	S	G	K	S	T	Q	A	S	I	L	S	T	K	L	S	P	S	K	L	I	K	F	P	D	R	S	T	P	I	G	K	L	I	N	E	Y	L	T	N	K	S	F	T	L	S	D	Q	A	A	H	L	L	F	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B									S	T	T	S	S												S	S	S						S	S		T	T	S													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	R	W	E	L	S	Q	Q	I	Q	D	L	L	N	Q	G	Y	F	I	I	L	D	R	Y	I	Y	S	G	I	A	Y	T	L	A	K	N	D	F	H	D	E	T	I	S	Q	G	K	N	K	Q	Q	L	N	N	I	D	W	L	L	S	P	D	K	G	L	P	K	P	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T							S											G	G	G	G			B	T	T	T	B		S	S			T	T	T	T							G	G	G	T	T	S	B			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	L	F	L	T	L	D	L	E	E	I	S	K	R	K	G	W	G	D	E	R	Y	E	L	Q	Q	F	Q	A	K	V	K	Q	C	F	L	E	I	L	D	T	N	K	D	P	T	I	R	I	V	D	V	G	G	K	T	I	D	Q	V	T	T	Q	L	W	E	I	I	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S	S						T	T																			T	T	T		T	T							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	N	K	N	H	E	L	I	N	D	S	I	Q	F	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S		B						B