PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5udmA_

Fold library id	PDB Header	Molecule	Title
c5udmA_	2.64	PDB header: hydrolase	Chain: A: PDB Molecule: phage-associated cell wall hydrolase;

Links to external resources
Added to library: Sat Dec 30 08:25:31 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T V S E V I S Y W R G L A D T L A W G W Q C A D V T N G T T T N F F G V T L W G N A I D L L D S A K A Q G L E V I Y D A P G I N P K A G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
S S
S
G G G T T
B T T B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L F V X F T Y G H P Y G H T G I I I A D S D G Y T I Q T I E Q G G P A R Y V T R A F S D G D G Y I V G W I R P P Y S D T R K L K D E V G T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
S S
S B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E V X V P A L N V R R E P S L N G E I V A C Y Q Y G X T G T Y D S V Y V G D G Y I W V S Y V G A S G X R N Y X A V G D A D G D Y N V N P Y C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S S T T
T T
T T
T T S S T T S

. . . . .

Sequence K F Y L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	V	S	E	V	I	S	Y	W	R	G	L	A	D	T	L	A	W	G	W	Q	C	A	D	V	T	N	G	T	T	T	N	F	F	G	V	T	L	W	G	N	A	I	D	L	L	D	S	A	K	A	Q	G	L	E	V	I	Y	D	A	P	G	I	N	P	K	A	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S	B		S											S					S		G	G	G								T	T							B	T	T	B				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	F	V	X	F	T	Y	G	H	P	Y	G	H	T	G	I	I	I	A	D	S	D	G	Y	T	I	Q	T	I	E	Q	G	G	P	A	R	Y	V	T	R	A	F	S	D	G	D	G	Y	I	V	G	W	I	R	P	P	Y	S	D	T	R	K	L	K	D	E	V	G	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		T	T								S				S	S																		S	B		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	V	X	V	P	A	L	N	V	R	R	E	P	S	L	N	G	E	I	V	A	C	Y	Q	Y	G	X	T	G	T	Y	D	S	V	Y	V	G	D	G	Y	I	W	V	S	Y	V	G	A	S	G	X	R	N	Y	X	A	V	G	D	A	D	G	D	Y	N	V	N	P	Y	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						S	S	S	S	T	T									T	T												T	T									T	T	S	S											T	T						S
	.	.	.	.	.
Sequence	K	F	Y	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)