PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5ubbA_

Fold library id	PDB Header	Molecule	Title
c5ubbA_	2.00	PDB header: transferase	Chain: A: PDB Molecule: alpha n-terminal protein methyltransferase 1b;

Links to external resources
Added to library: Sat Mar 25 09:01:36 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S Q V I N G E M Q F Y A R A K L F Y Q E V P A T E E G M M G N F I E L S S P D I Q A S Q K F L R K F V G G P G R A G T D C A L D C G S G I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S S
G G G T T B S S T T S B
S S T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V S K H V L L P V F N S V E L V D M M E S F L L E A Q N Y L Q V K G D E S Y H C Y S L Q E F T P P F R R Y D V I W I Q W V S G H L T D K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S S
T T
-
G G G
T T
S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L L A F L S R C R D G L K E N G I I I L K D N V A R E G C I L D L S D S S V T R D M D I L R S L I R K S G L V V L G Q E K Q D G F P E Q C I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B S S S
T T T T
B T T
S S
T T S

. . . . . . . .

Sequence P V W M F A L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Q	V	I	N	G	E	M	Q	F	Y	A	R	A	K	L	F	Y	Q	E	V	P	A	T	E	E	G	M	M	G	N	F	I	E	L	S	S	P	D	I	Q	A	S	Q	K	F	L	R	K	F	V	G	G	P	G	R	A	G	T	D	C	A	L	D	C	G	S	G	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S		S	S						S	S		G	G	G														T	T	B	S	S	T	T	S	B		S	S						T		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	S	K	H	V	L	L	P	V	F	N	S	V	E	L	V	D	M	M	E	S	F	L	L	E	A	Q	N	Y	L	Q	V	K	G	D	E	S	Y	H	C	Y	S	L	Q	E	F	T	P	P	F	R	R	Y	D	V	I	W	I	Q	W	V	S	G	H	L	T	D	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T		S							S												T	T				-								G	G	G					T	T									S		G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	A	F	L	S	R	C	R	D	G	L	K	E	N	G	I	I	I	L	K	D	N	V	A	R	E	G	C	I	L	D	L	S	D	S	S	V	T	R	D	M	D	I	L	R	S	L	I	R	K	S	G	L	V	V	L	G	Q	E	K	Q	D	G	F	P	E	Q	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T														B	S	S	S					T	T	T	T					B											T	T											S	S		T	T	S
	.	.	.	.	.	.	.	.
Sequence	P	V	W	M	F	A	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)