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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5u2pA_

Fold library idPDB HeaderMoleculeTitle
c5u2pA_1.76PDB header: transport proteinChain: A: PDB Molecule: sugar abc transporter substrate-binding protein;


Added to library: Wed Mar 1 02:00:01 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VRLSVLIREKHYSSGLQNVFTKLELEEGIAVTVETIQDDQYPTVLHARLADGTAPDVVEVSLPSLHALDP
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Known secondary structure (DSSP)
GGG




GGGTT


STTTGGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence YLYFVDLSKEAWIPDLLIPPTDPYGKTFALPLNCAVSINALFYNKDLFDRYGISEPKSWNELLESCALIV
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Known secondary structure (DSSP) B


TTSTTGGGBSS



TTS


SS
S
STT




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSIVPLALSTTESFPHTLLADAITKVLGEQGARDLVKRATDDSIDWTHERALYPVLGAYLELFKRGYVNK
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Known secondary structure (DSSP)





SBSS
TT


GGG
GGGTTSS
G
 .........220.........230.........240.........250.........260.........270.........280
Sequence HHRTARVREIIHDFTRDRIAMYFGSHLVADAIIKERPGINLGACVLPITENAQDVLTGSLEVQGLAVHKK
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Known secondary structure (DSSP) GGTT

TTT
STT





STTTTS



BTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SARVATACRALSVLASAAYQNSFFEEHKGLPAFRNTTSAVIPACLSALFKSHIEKGKVIQAIDAYAQAQN
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Known secondary structure (DSSP)
TTSTTT

SS
SBTT
TTS


GGGTGGGT

GGGSGGGB
 .........360.........370.........380.
Sequence TASVFPDFAAYVTDPAPTAHTMLHRAQTEAR
Predicted secondary structure



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Known secondary structure (DSSP)


SS

GGGG

SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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