PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5t2tB_

Fold library id	PDB Header	Molecule	Title
c5t2tB_	1.97	PDB header: transferase	Chain: B: PDB Molecule: rna-directed rna polymerase l;

Links to external resources
Added to library: Sat Sep 16 09:27:55 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K H H H H H H D E I I S E L R E L C L N Y I E Q D E R L S R Q K L N F L G Q R E P R M V L I E G L K L L S R C I E I D S A D K S G C T H N H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T
S T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D D K S V E T I L V E S G I V C P G L P L I I P D G Y K L I D N S L I L L E C F V R S T P A S F E K K F I E D T N K L A C I R E D L A V A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T
S
S T T
S S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence V T L V P I V D G R C D Y D N S F M P E W A N F K F R D L L F K L L E Y S N Q D E K V F E E S E Y F R L C E S L K T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	H	H	H	H	H	H	D	E	I	I	S	E	L	R	E	L	C	L	N	Y	I	E	Q	D	E	R	L	S	R	Q	K	L	N	F	L	G	Q	R	E	P	R	M	V	L	I	E	G	L	K	L	L	S	R	C	I	E	I	D	S	A	D	K	S	G	C	T	H	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S				G	G	G									T			S																								T	T					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	D	K	S	V	E	T	I	L	V	E	S	G	I	V	C	P	G	L	P	L	I	I	P	D	G	Y	K	L	I	D	N	S	L	I	L	L	E	C	F	V	R	S	T	P	A	S	F	E	K	K	F	I	E	D	T	N	K	L	A	C	I	R	E	D	L	A	V	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T	T	T					S							S						T	T											S	S																	T	T							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	V	T	L	V	P	I	V	D	G	R	C	D	Y	D	N	S	F	M	P	E	W	A	N	F	K	F	R	D	L	L	F	K	L	L	E	Y	S	N	Q	D	E	K	V	F	E	E	S	E	Y	F	R	L	C	E	S	L	K	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S				T	T	S																											T	T	S										T	T