PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5sv6A_

Fold library id	PDB Header	Molecule	Title
c5sv6A_	1.92	PDB header: unknown function	Chain: A: PDB Molecule: extracellular solute-binding protein, family 3;

Links to external resources
Added to library: Sat Jul 15 08:30:58 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T L K V C A A S D E X P Y S N K Q Q E G F E N Q L A K I L A D T X D R E L E F V W S D K A A I F L V T E K L L K N Q C D V V X G V D K G D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T T S
S T T
S S
G G G T G G G T S
S T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V A T S D P Y Y K S G Y A F I Y P A D K G L D I K N W Q S P A L K D X S K F A I V P G S P S E V X L R E I D K Y E G N F N Y T X S L I G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
T T S
S S T T
T
T T S T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K S R R N Q Y V R Y A P D L L V S E V V S G K A D I A H I W A P E A A R Y V K S A S V P L K X V V S E E I A P T R D G E G V R Q Q F E Q S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T B S S
T S S S T
S S
S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . .

Sequence A V R S D D Q E L L K E I N T A L H K A D P K I K A V L K D E G I P L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	L	K	V	C	A	A	S	D	E	X	P	Y	S	N	K	Q	Q	E	G	F	E	N	Q	L	A	K	I	L	A	D	T	X	D	R	E	L	E	F	V	W	S	D	K	A	A	I	F	L	V	T	E	K	L	L	K	N	Q	C	D	V	V	X	G	V	D	K	G	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			T	T	T			T	T	S		S													T	T									S	S		G	G	G					T	G	G	G	T	S		S							T	T		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	A	T	S	D	P	Y	Y	K	S	G	Y	A	F	I	Y	P	A	D	K	G	L	D	I	K	N	W	Q	S	P	A	L	K	D	X	S	K	F	A	I	V	P	G	S	P	S	E	V	X	L	R	E	I	D	K	Y	E	G	N	F	N	Y	T	X	S	L	I	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S				S													T	T	S					S	S	T	T						T								T	T	S									T	T											T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	S	R	R	N	Q	Y	V	R	Y	A	P	D	L	L	V	S	E	V	V	S	G	K	A	D	I	A	H	I	W	A	P	E	A	A	R	Y	V	K	S	A	S	V	P	L	K	X	V	V	S	E	E	I	A	P	T	R	D	G	E	G	V	R	Q	Q	F	E	Q	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	B	S	S															T	S	S	S															T		S	S									S					S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Sequence	A	V	R	S	D	D	Q	E	L	L	K	E	I	N	T	A	L	H	K	A	D	P	K	I	K	A	V	L	K	D	E	G	I	P	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T															T												T