PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5oyjC_

Fold library id	PDB Header	Molecule	Title
c5oyjC_	2.38	PDB header: signaling protein	Chain: C: PDB Molecule: vascular endothelial growth factor receptor 2;

Links to external resources
Added to library: Sat Mar 17 09:03:53 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P L A E K P F V A F G S G M E S L V E A T V G E R V R I P A K Y L G Y P P P E I K W Y K N G I P L E S N H T I K A G H V L T I M E V S E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S T T S
S
T T
B T T S S S S
G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D T G N Y T V I L T N P I S K E K Q S H V V S L V V Y V P P Q I G E K S L I S P V D S Y Q Y G T T Q T L T C T V Y A I P P P H H I H W Y W Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
T T T
S S
S S
T T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L E E E C A N E N P Y P C E E W R S V E D F Q G G N K I E V N K N Q F A L I E G K N K T V S T L V I Q A A N V S A L Y K C E A V N K V G R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G B
B S S
T T S
T T S
T T S S
S
T T

. . . . . . . . . 220 . . .

Sequence E R V I S F H V T R H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	L	A	E	K	P	F	V	A	F	G	S	G	M	E	S	L	V	E	A	T	V	G	E	R	V	R	I	P	A	K	Y	L	G	Y	P	P	P	E	I	K	W	Y	K	N	G	I	P	L	E	S	N	H	T	I	K	A	G	H	V	L	T	I	M	E	V	S	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S	S						T	T			S						T	T	S												S									T	T						B	T	T				S	S					S	S			G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	T	G	N	Y	T	V	I	L	T	N	P	I	S	K	E	K	Q	S	H	V	V	S	L	V	V	Y	V	P	P	Q	I	G	E	K	S	L	I	S	P	V	D	S	Y	Q	Y	G	T	T	Q	T	L	T	C	T	V	Y	A	I	P	P	P	H	H	I	H	W	Y	W	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G											T	T	T																			S	S					S	S						T	T													S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	E	E	E	C	A	N	E	N	P	Y	P	C	E	E	W	R	S	V	E	D	F	Q	G	G	N	K	I	E	V	N	K	N	Q	F	A	L	I	E	G	K	N	K	T	V	S	T	L	V	I	Q	A	A	N	V	S	A	L	Y	K	C	E	A	V	N	K	V	G	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	B								B	S	S				T	T	S		T	T	S														T	T											S	S			S											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	E	R	V	I	S	F	H	V	T	R	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)