PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5ovyA_

Fold library id	PDB Header	Molecule	Title
c5ovyA_	1.90	PDB header: dna binding protein	Chain: A: PDB Molecule: putative transcriptional regulator, tetr family;

Links to external resources
Added to library: Sat Mar 31 09:10:24 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D A E R N R K R V I A A A R E L F A V H G L E S T L N E V A H H A G L G V G T V Y R R F P T K E A L F E A I Y V D G M D Q L S G L A E A A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R H E N S W E G F E W F V H Q M C E I T A T N R G L R E I A F S K A H G G D H V E A G R A R L L P L L S K V V E R A Q E D G Y L R P E A S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S T
T S S
S T T
B
T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200

Sequence T D M P F F G V L T G A V S E F A G E V N A D L W R R Y M A I L I E G M R R R D D Q E R L E V D A L D E A Q I D A A M T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T T T B
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	A	E	R	N	R	K	R	V	I	A	A	A	R	E	L	F	A	V	H	G	L	E	S	T	L	N	E	V	A	H	H	A	G	L	G	V	G	T	V	Y	R	R	F	P	T	K	E	A	L	F	E	A	I	Y	V	D	G	M	D	Q	L	S	G	L	A	E	A	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T												T											S	S																								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	H	E	N	S	W	E	G	F	E	W	F	V	H	Q	M	C	E	I	T	A	T	N	R	G	L	R	E	I	A	F	S	K	A	H	G	G	D	H	V	E	A	G	R	A	R	L	L	P	L	L	S	K	V	V	E	R	A	Q	E	D	G	Y	L	R	P	E	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S																		T									T	S	S				S																								T	T		B		T	T			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Sequence	T	D	M	P	F	F	G	V	L	T	G	A	V	S	E	F	A	G	E	V	N	A	D	L	W	R	R	Y	M	A	I	L	I	E	G	M	R	R	R	D	D	Q	E	R	L	E	V	D	A	L	D	E	A	Q	I	D	A	A	M	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																		S	T	T	T	T														B			T	T					S	S