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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5opqA_

Fold library idPDB HeaderMoleculeTitle
c5opqA_1.70PDB header: hydrolaseChain: A: PDB Molecule: 3,6-anhydro-d-galactosidase;


Added to library: Sat Dec 2 08:16:31 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIVLENGKLNINIDSKTGCFSVTEKTSGHVWKSDPWENAAGLLTLTDSKGKKQTVNISKSKKIEVSKTAK
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Known secondary structure (DSSP)

SS
TTT

TTT


S
TTT

S

TTS
GGGSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence NTVSLKFIDPVFEDGSVAKGVSIATELRLDPNNAQLDVEVTEHRSGNFTLYDLRYPARAFSLKTDEDKGA
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Known secondary structure (DSSP) TS
B
TTS
B
TT

SSSS
TTS
SSTT
S
TTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence AVIPQKQGVICPSYIFPMNGGRFCKWDDATYNNKSQGSLELFNNGTGLTMPWWGTYNEKSAVMGIVDVSA
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Known secondary structure (DSSP)
BTT
SS




TTSGGG
BS
SSSSBSSS
SS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RPHMQYNINNNGQYLFNAKGVMSPYQRIVFLDPIWKLDQEKGKMRISYHFIPGGDYVDMAKVYQKEAKAR
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Known secondary structure (DSSP)


SGGGTTTTT



S

TTT

S
T

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GHFVSLQEKLKRNPNVNKLPGAIYFGIYGGYPHYVNMPGMAFTFDELKNIIKTIHDDLRVDKAFVHAWGT
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Known secondary structure (DSSP) T




GGGGGSTT

STTTSSS
TTT


TT


S

 .........360.........370.........380.........390.........400.........410.........420
Sequence FSNFVPHNYPISEALGGPEKLKAAVDLAKSYGYLYSSYHAYSPMLENDPNFTTDLMQRDAEGKLMNTGSR
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Known secondary structure (DSSP) BSS
TT


SB
TTTT
TT

SS


TT
TT

STTB
B
TTS
BS
TT
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence WARVDPKFQKGLAQKNIEKEISYLGLEADITDITFAAYRENGKEGRIELAKYIDSFNLVNGTEHGQEQWI
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Known secondary structure (DSSP) TS
B
GGGT


STTS


STTT

S

GGGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence PYFDMFEGMTYLEDRPLSVISHPAPLFNLVYHEAIANFGKIQDPDNEVTANGDFRIKALRSMLFGRGTTI
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Known secondary structure (DSSP) GG
S

S

SS
TTGGG


TTT


TTS
TTS
BTTB
T
B
 .........570.........580.........590.........600.........610.........620.........630
Sequence FFAPYEFEGMRPMIEMARDLVSPVHKETFYSELKSHEYLSADYKVQRSRFSSGTEVIANLGPVAQKIEGG
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Known secondary structure (DSSP)
GGGTTS

STTS
TTT
SSS

GGG
 .........640.........650.........
Sequence ISIPGYGYRIQMKDGSLKTGHFQVSLHMD
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Known secondary structure (DSSP)

TT
TTS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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