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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5oj2B_

Fold library idPDB HeaderMoleculeTitle
c5oj2B_3.20PDB header: cell adhesionChain: B: PDB Molecule: mam domain-containing glycosylphosphatidylinositol anchor


Added to library: Sat Aug 26 11:52:08 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGVYAPAQAQIIHAGQACERVYTIREGDTLVLQCLVTGHPRPQVRWTKTTSVLNETLRIEKIQRLQGGRY
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Known secondary structure (DSSP)

S

SS



TTS
S




SSSS

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YCKAENGVGVPAIKSIRVDVQYLDEPVLTVHQTISDVRGSFYQEKTVFLRCTVNSNPPARFIWKRGAETL
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Known secondary structure (DSSP)
SSSS



TT

S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SHSVDIYEPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVCSIPDKSITFQLTNTTAPPALKLSVNETL
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Known secondary structure (DSSP)





SSSSSS
S

GGG
S
TTGGG




TT
SS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVNPGDNVTXQCSLTGGDPQPEVLWSHSPGPLPPNSLVQGGNLTIWRIRVEDSGYYNCTAINNVGNPAKK
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Known secondary structure (DSSP)
TT

S

SSS

TT
SS
S

GGG

SBSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TVNLLVRSXKNATFQITPDVIKESETIQLGQDLKLSCHVDAVPQEKVVYSWYKNGKPARFSDLITRNDPE
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Known secondary structure (DSSP)



TTTT
SS

TTS
TTGGGTTB






S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPPVTCSLEIIDLRFSDYGTYLCVATFQGAPIPDLSVEVNISSETVPPTISVPKGQSTITVREGSRAELQ
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Known secondary structure (DSSP) SSSS
SS

GGG
STT
SS


STT

STTTTTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence CEVRGKPKPPIIWSRVDKETPXPSGTXTVETYDGKLRLESVSRDXSGTYKCQTARYNGFNIRPREALVQL
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Known secondary structure (DSSP)
S


SSS



TTSSS
SS
SS

GGG

SSS
SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence NVQFPPVVEPAFQDVRQGXGRSVTLRCTXLKGSPXKVATSVWRFNGTLLAQPPAEQQDYSELKVDSVSRE
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Known secondary structure (DSSP)
S

TT

S
S

TT



SS

TTSS
STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence TSGSYECSISNDVGVSACLFQVSAKAYSPEFYYDTPNPTLSQKQSKNYSYILQWTQKEPDAVDPILKYRL
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Known secondary structure (DSSP) T

SS







SS


SSTTS
SSTTSSS


 .........640.........650.........660.........670.........680.........690..
Sequence EVRQLAQRNTIQTFIPVQKXEKGLLLEHILPNLKVPQSYEVRLTPITSFGAGDXAARIIRYX
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Known secondary structure (DSSP) TT
S





TT


SS

TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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