PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5o9zE_

Fold library id	PDB Header	Molecule	Title
c5o9zE_	4.50	PDB header: splicing	Chain: E: PDB Molecule: u4/u6 small nuclear ribonucleoprotein prp3;

Links to external resources
Added to library: Sat Aug 19 08:36:22 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V Y L T K K E Q K K L R R Q T R R E A Q K E L Q E K V R L G L M P P P E P K V R I S N L M R V L G T E A V Q D P T K V E A H V R A Q M A K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T T
S
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q K A H E E A N A A R K L T A E Q R K V K K I K K L K E D I S Q G V H I S V Y R V R N L S N P A K K F K I E A N A G Q L Y L T G V V V L H K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S T S
S S
B
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D V N V V V V E G G P K A Q K K F K R L M L H R I K A V K K T N K C V L V W E G T A K D R S F G E M K F K Q C P T E N M A R E H F K K H G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S S
S
S
S
S S S T T

. . . . . . . . .

Sequence E H Y W D L A L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Y	L	T	K	K	E	Q	K	K	L	R	R	Q	T	R	R	E	A	Q	K	E	L	Q	E	K	V	R	L	G	L	M	P	P	P	E	P	K	V	R	I	S	N	L	M	R	V	L	G	T	E	A	V	Q	D	P	T	K	V	E	A	H	V	R	A	Q	M	A	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S		S										T					T	T			S		S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	K	A	H	E	E	A	N	A	A	R	K	L	T	A	E	Q	R	K	V	K	K	I	K	K	L	K	E	D	I	S	Q	G	V	H	I	S	V	Y	R	V	R	N	L	S	N	P	A	K	K	F	K	I	E	A	N	A	G	Q	L	Y	L	T	G	V	V	V	L	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											S				S	S													S	S	T												S			S	S		B			S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	N	V	V	V	V	E	G	G	P	K	A	Q	K	K	F	K	R	L	M	L	H	R	I	K	A	V	K	K	T	N	K	C	V	L	V	W	E	G	T	A	K	D	R	S	F	G	E	M	K	F	K	Q	C	P	T	E	N	M	A	R	E	H	F	K	K	H	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																			T	T	S	S	S														S									S		S			S	S	S								T	T
	.	.	.	.	.	.	.	.	.
Sequence	E	H	Y	W	D	L	A	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T