PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5nwfB_

Fold library id	PDB Header	Molecule	Title
c5nwfB_	2.60	PDB header: toxin	Chain: B: PDB Molecule: fic family protein;

Links to external resources
Added to library: Sat Jun 2 08:23:52 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L E N K L G I I N Q L E L N R V E E R V S K E N A K R L Y D S G D I D R I E V G T F K G L S Y I H N Y L F E D I Y E F A G K V R S Q N I S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T S G G G S S
S S S T T T S T T T T S
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G N F R F A P V M Y L E I A L E H I D K M P Q R N L D E I V A K Y V E M N I A A P F R E G N G R A T R I W L D L I L K K E L K R V V D W N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G S
S S
S S S
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence I N K E D Y L S A M E R S P V K D L E I K Y L I S N A L T D K I N D R E I F M K G I D I S Y Y Y E G Y T E Y N V D E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
S
T T
T T
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	E	N	K	L	G	I	I	N	Q	L	E	L	N	R	V	E	E	R	V	S	K	E	N	A	K	R	L	Y	D	S	G	D	I	D	R	I	E	V	G	T	F	K	G	L	S	Y	I	H	N	Y	L	F	E	D	I	Y	E	F	A	G	K	V	R	S	Q	N	I	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S																									T	S	G	G	G	S	S		S	S	S													T	T	T	S	T	T	T	T	S			S	S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	N	F	R	F	A	P	V	M	Y	L	E	I	A	L	E	H	I	D	K	M	P	Q	R	N	L	D	E	I	V	A	K	Y	V	E	M	N	I	A	A	P	F	R	E	G	N	G	R	A	T	R	I	W	L	D	L	I	L	K	K	E	L	K	R	V	V	D	W	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						G	G	G											S			S	S																	S	S	S																			S					G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	I	N	K	E	D	Y	L	S	A	M	E	R	S	P	V	K	D	L	E	I	K	Y	L	I	S	N	A	L	T	D	K	I	N	D	R	E	I	F	M	K	G	I	D	I	S	Y	Y	Y	E	G	Y	T	E	Y	N	V	D	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	T	T															S		T	T																T	T			S			G	G	G