PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5nr4A_

Fold library id	PDB Header	Molecule	Title
c5nr4A_	1.20	PDB header: structural protein	Chain: A: PDB Molecule: clip-associating protein 2;

Links to external resources
Added to library: Sat Jun 2 08:24:10 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R S M E Y F C A Q V Q Q K D V G G R L Q V G Q E L L L Y L G A D L E E D L G R L G K T V D A L T G W V G S S N Y R V S L M G L E I L S A F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
G G G
T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D R L S T R F K S Y V A M V I V A L I D R M G D A K D K V R D E A Q T L I L K L M D Q V A P P M Y I W E Q L A S G F K H K N F R S R E G V C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G G G G T T
S S T S
G G G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L C L I E T L N I F G A Q P L V I S K L I P H L C I L F G D S N S Q V R D A A I L A I V E I Y R H V G E K V R M D L Y K R G I P P A R L E M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T T
S S
T T T S

. . . . . . . . . 220

Sequence I F A K F D E V Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	S	M	E	Y	F	C	A	Q	V	Q	Q	K	D	V	G	G	R	L	Q	V	G	Q	E	L	L	L	Y	L	G	A	D	L	E	E	D	L	G	R	L	G	K	T	V	D	A	L	T	G	W	V	G	S	S	N	Y	R	V	S	L	M	G	L	E	I	L	S	A	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S		G	G	G																T	T	S																			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	R	L	S	T	R	F	K	S	Y	V	A	M	V	I	V	A	L	I	D	R	M	G	D	A	K	D	K	V	R	D	E	A	Q	T	L	I	L	K	L	M	D	Q	V	A	P	P	M	Y	I	W	E	Q	L	A	S	G	F	K	H	K	N	F	R	S	R	E	G	V	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	G	G	G												T	T		S	S																		T	S										G	G	G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	C	L	I	E	T	L	N	I	F	G	A	Q	P	L	V	I	S	K	L	I	P	H	L	C	I	L	F	G	D	S	N	S	Q	V	R	D	A	A	I	L	A	I	V	E	I	Y	R	H	V	G	E	K	V	R	M	D	L	Y	K	R	G	I	P	P	A	R	L	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T	S													T	T		S	S																				T							T	T	S
	.	.	.	.	.	.	.	.	.	220
Sequence	I	F	A	K	F	D	E	V	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T