Fold library entry viewer: c5nd1A_

Added to library: Sat Dec 2 08:17:09 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	Q	M	Q	Q	R	D	N	G	E	E	T	L	A	N	I	K	H	S	A	R	S	E	L	K	D	M	N	V	S	G	L	A	G	I	N	I	Q	A	G	G	Y	D	L	T	G	L	S	L	T	D	E	L	I	A	Q	G	L	S	N	V	G	L	L	P	F	E	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S	S	T	T																		T		S	S			S	S	S	S	S	T	T	T	T	G	G	G		S	S	T	T								T	T			T	T			S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	V	L	E	L	A	E	A	I	T	V	T	A	N	N	T	D	M	G	G	S	G	Q	Y	C	E	Q	G	A	W	R	A	W	L	H	V	G	L	N	M	A	K	H	H	V	R	I	R	S	S	A	A	M	D	F	G	T	H	R	M	M	A	C	D	P	A	S	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	B													S	S		S	S	S	S														B							S		B			B							S	S	S	S								S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	T	I	S	A	M	S	R	N	V	T	T	A	T	M	N	A	V	S	R	E	M	K	A	M	K	A	L	A	A	G	R	S	R	M	S	Q	S	D	I	A	D	N	N	D	C	R	G	F	A	F	G	V	L	S	R	M	V	M	H	N	S	A	R	R	H	G	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																							S				T	T	S	S																					T	T	S						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	G	R	L	Q	E	L	G	E	N	D	A	S	T	A	D	T	Y	L	T	W	E	L	A	C	A	H	G	K	G	E	V	A	I	T	P	V	P	A	A	W	L	D	P	E	A	Q	L	T	G	R	E	R	V	F	S	E	A	L	A	R	L	V	D	P	D	V	G	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S						S	S					S									S			B		S	S	S												S	S	S																	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	V	K	I	D	G	V	T	Q	N	A	A	E	N	A	R	V	H	Y	A	T	R	P	D	P	M	S	W	L	D	D	N	T	G	L	S	A	D	S	N	A	G	R	I	S	G	E	H	Y	T	L	W	K	G	R	H	S	K	V	H	L	T	I	Q	L	K	Q	L	Y	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S			S			B							S	S	S	S						S			S		S	S																	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	M	S	T	T	A	A	T	A	E	P	R	A	D	S	I	V	Y	Y	L	K	G	F	E	G	L	G	A	C	A	E	F	L	L	A	N	S	R	F	G	H	H	S	F	L	P	G	V	F	G	V	T	A	D	V	H	E	A	A	Y	A	Q	N	Q	A	L	F	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S				T	T							S	S			S									S				S	S	S	S	S				S	S													S		T	T							S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	G	D	R	M	P	P	A	T	F	T	K	A	Q	L	A	T	A	T	Y	A	L	M	R	R	Y	D	I	S	E	R	T	C	H	F	A	I	T	T	I	G	H	M	V	A	Q	T	A	V	R	D	L	N	N	G	S	L	S	P	L	P	F	R	V	N	L	S	P	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S								T					T	T	T	T							T	T																						B			S	S	S								B			B				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	Q	G	V	Q	F	W	D	M	N	D	T	E	G	S	V	S	V	H	D	M	G	I	G	K	E	L	L	T	A	T	Y	A	L	G	A	M	A	S	L	A	H	V	C	E	Q	G	G	T	G	E	E	M	S	A	I	E	V	S	R	F	T	D	V	H	T	V	A	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S								S	S		T	T	T	T	T	T																													S	S	S		B				T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	F	R	K	V	V	M	T	E	L	G	D	L	K	L	R	G	S	E	V	T	H	S	S	Q	E	A	L	F	A	Q	K	M	K	A	V	W	S	S	M	A	E	G	S	T	R	L	Y	N	L	N	Q	A	Y	G	P	F	V	D	V	Q	L	A	R	I	R	S	S	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											S	S		S						S	S				G	G	G	T					T	G	G	G	G	T	T											T							S	T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	D	I	G	A	S	R	Q	M	M	D	A	S	A	L	I	K	H	A	Q	N	V	T	Y	D	W	P	Q	N	E	S	G	C	P	V	Q	F	I	A	L	P	V	P	S	T	I	T	H	Y	A	T	P	A	I	G	T	E	R	W	F	A	T	T	R	L	N	A	A	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S			S		B		T	T					S			S								S	S	S	S						B			S					S	S				B		S									B						S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	V	I	S	E	I	R	W	T	N	G	L	N	S	D	D	R	A	G	V	H	V	F	A	Y	G	R	S	T	I	V	S	S	P	L	G	C	A	E	A	M	A	A	M	V	I	A	G	E	H	K	V	V	R	R	H	T	S	I	A	R	A	Q	S	A	R	T	A	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	G	G	G				B			B	T	T	S			S	S	S												S	S		T	T	S										T	S			S	S												S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	A	G	A	V	L	G	A	R	N	G	D	M	M	T	I	I	R	P	S	T	S	V	A	S	S	A	V	H	L	R	G	Y	I	P	M	A	A	M	N	M	L	P	I	T	D	G	D	C	D	L	V	V	A	D	T	R	T	R	P	G	R	M	S	T	S	P	E	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T									S		S	S	S		S										S					T	S					S	S						S								S	S		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	R	R	G	V	L	A	S	D	Y	H	V	D	I	A	T	D	G	N	I	R	H	V	A	R	E	V	Y	T	V	A	D	I	P	T	V	S	E	R	V	S	G	L	A	L	R	P	Y	E	R	S	C	V	R	D	A	S	T	L	H	S	M	L	C	G	A	V	P	L	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T															B		S													S	S	S	S	S					T	T	T	S	T	T	G	G	G	S	S							S				S		S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
Sequence	G	G	G	E	P	M	K	L	G	D	N	T	P	V	T	N	R	Q	A	L	R	P	P	E	Y	N	R	N	P	A	L	R	M	P	A	R	F	Q	M	G	T	T	A	C	A	F	T	K	A	L	G	D	V	R	A	Q	M	E	L	R	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S					S	S										T	T			G	G	G	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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