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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5n6mA_

Fold library idPDB HeaderMoleculeTitle
c5n6mA_3.10PDB header: membrane proteinChain: A: PDB Molecule: apolipoprotein n-acyltransferase;


Added to library: Sat Jul 15 08:39:41 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WISRPGWPGHLLALAAGALTPLALAPFDYWPLAILSIALLYLGLRGLPGKSALWRGWWYGFGAFGAGTSW
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Known secondary structure (DSSP)

SSSSTTTGGGTSSS

TTSS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IYVSIHDYGAASVPLASLLMLGFTAGVAFFFALPAWLWARCLRRDNAPLGDALAFAALWLALELFRSWFL
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Known secondary structure (DSSP) TT

T

STTTTTTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGFPWLYAGYSQLQGPLAGLVPVGGVWLSSFVIALSAALLVNLPRLFPHGASLLLGLVLLLGPWAAGLYL
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Known secondary structure (DSSP) S



S
GGGGGTTSGGGGTGGGTTTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGHAWTHSAGEPLRVVAIQGNIAQEPNQVRAQLDLYRDLSLPQQDVDLIVWPETAVPILQDMASGYLGAM
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Known secondary structure (DSSP) TT



SS








TTTT

S
S
TTSS
S
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GQVADEKNAALITGVPVRERLADGKSRYFNGITVVGEGAGTYLKQKLVPFGEYVPLQDLLRGLIASDFAR
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Known secondary structure (DSSP) TT

SSS
S


S

TTTT

TTTTS






 .........360.........370.........380.........390.........400.........410.........420
Sequence GPADQPLLKAKGYQIAPYICYEVVYPEFAAALAAQSQVLLTVSNDTWFGTSIGPLQHLQMAQMRALESGR
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Known secondary structure (DSSP)

SS


TTGGGGG
TT
S

TTT
SSST
 .........430.........440.........450.........460.........470.........480.........490
Sequence WMIRATNNGVTGLIDPYGRIVRQIPQFQQGILRGEVIPMQGLTPYLQYRVWPLAGLAGVLLLWALLGRQL
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Known secondary structure (DSSP)
SSS

TTS

SSS





S
S
 .
Sequence R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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