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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5mkbF_

Fold library idPDB HeaderMoleculeTitle
c5mkbF_1.70PDB header: sugar binding proteinChain: F: PDB Molecule: male1;


Added to library: Sat Jul 8 09:35:09 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVSGSVKLWVDTTQVPYYKKIVANFNKKYPDVKVKVTQSPNGSANAKTDVGKDPAKAADVFEVANDQLGS
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Known secondary structure (DSSP)



TT
TT
SS
GGG
GGGS
SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence MAEAGYINPLSPDATKAVKNNNVAVASEGVTWKGKMFAYPFAEQAQTIYYNKSKLTADDVKTWDGLTAKG
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Known secondary structure (DSSP) TSB



B
TTT



TTTS
TTGGGBTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VLATDFTNAYNFYPVFLSAGTQLYGKTGETVKGTDVNSAKGEQAMAWFAQQKSNKGVMQTSNALNQLKSG
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Known secondary structure (DSSP)

TT
TTT

SSTTTS

TT



SSGGG
TT
S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KAAAILDGPWNSANIKKILGKNFAVAPYPTIKLDGKDVQMQAFLGIETFAVNSHASGSNQKAAATLASFI
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Known secondary structure (DSSP) S
S
GGGGGG


TT

BTTS
GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TNKESQLIVYDHSGQIPVDKTAQKSSKVASDPVAGAVMTMAKPGNSTLMPKMPQMATFWNDAAPLINGAY
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Known secondary structure (DSSP) TS


BTTTTSSTTTTT
SBTT



TT
 .........360.........370...
Sequence TGSIPASQYSTKLDTFVKNISKA
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Known secondary structure (DSSP) SSS
GGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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