PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5lw6A_

Fold library id	PDB Header	Molecule	Title
c5lw6A_	1.80	PDB header: adp-ribose binding protein	Chain: A: PDB Molecule: ddb_g0293866;

Links to external resources
Added to library: Thu Feb 9 13:43:38 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S K I I G P K Y R K K R L T D A L K E R S L A F P F I S T S T F G F N I D D A T E I S A N A I S E Y L H F H E K E D D I K L K X X V E K S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G
T T S S T T
T T T
T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y S D N L I Q S F K K H F N D K W D K R F E I I K I E N S N S L E Q F N L G C K L F A T E S T W R L K K T P Q N K Q L Y E X L D T G T F E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S S T T
G G G S
S S
S
T T
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V T K N L Y P N C G K I G K V Y P I S L Q N N K Q L V N S I L H K E Y G I D I V I L V L G V N X N P N K P D A F K E N S E L A K P L L L E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S T T S S S T T S T T
B
T T S T T B
T T
T T

. . . . . . . . . 220 .

Sequence Y H S L F N A L D N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	K	I	I	G	P	K	Y	R	K	K	R	L	T	D	A	L	K	E	R	S	L	A	F	P	F	I	S	T	S	T	F	G	F	N	I	D	D	A	T	E	I	S	A	N	A	I	S	E	Y	L	H	F	H	E	K	E	D	D	I	K	L	K	X	X	V	E	K	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S			G	G	G									T	T	S	S	T	T																						T	T	T		T	T									T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	S	D	N	L	I	Q	S	F	K	K	H	F	N	D	K	W	D	K	R	F	E	I	I	K	I	E	N	S	N	S	L	E	Q	F	N	L	G	C	K	L	F	A	T	E	S	T	W	R	L	K	K	T	P	Q	N	K	Q	L	Y	E	X	L	D	T	G	T	F	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T				T	T							S	S	T	T		G	G	G	S		S	S		S								T	T		S			G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	T	K	N	L	Y	P	N	C	G	K	I	G	K	V	Y	P	I	S	L	Q	N	N	K	Q	L	V	N	S	I	L	H	K	E	Y	G	I	D	I	V	I	L	V	L	G	V	N	X	N	P	N	K	P	D	A	F	K	E	N	S	E	L	A	K	P	L	L	L	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T				T	T							S	S	T	T	S	S	S	T	T	S					T	T												B			T	T	S	T	T	B			T	T		T	T
	.	.	.	.	.	.	.	.	.	220	.
Sequence	Y	H	S	L	F	N	A	L	D	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											-