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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5lrbB_

Fold library idPDB HeaderMoleculeTitle
c5lrbB_2.90PDB header: transferaseChain: B: PDB Molecule: alpha-1,4 glucan phosphorylase;


Added to library: Sat May 6 08:27:54 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDSSAIASNIQHHADFTPLFSPEHSSPLKAYHATAKSVFDSLIMNWNATYDYYNKVNAKQAYYLSMEFLQ
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Known secondary structure (DSSP)

S
SS
SS






S



 .........80.........90.........100.........110.........120.........130.........140
Sequence GRALTNAIGNLELTGQYAEALKQLGHNLEDVASQEPDPALGNGGLGRLASCFLDSLATLNYPAWGYGLRY
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Known secondary structure (DSSP)


TT
TT

TTS



S

STT



 .........150.........160.........170.........180.........190.........200.........210
Sequence RYGLFKQIITKDGQEEVAENWLEMGNPWEIVRNDVSYPVKFYGKVVEGTDGRKHWIGGENIKAVAHDVPI
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Known secondary structure (DSSP) SSBS
TT


TTTT

TT
S
TTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGYKTKTTNNLRLWSTTVPSQNFDLGAFNAGDHAKANEAHLNAEKICHVLYPGDESSEGKILRLKQQYTL
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Known secondary structure (DSSP)
TTSS


GGGS
T
GGGTBSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence CSASLQDIISRFESRAGDSLNWEDFPSKVAVQMNDTHPTLCIPELMRILMDIKGLSWNEAWSITERTVAY
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Known secondary structure (DSSP) TTS

GGGSSTTTTTT


 .........360.........370.........380.........390.........400.........410.........420
Sequence TNHTVLPEALEKWSLDIMQKLLPRHVEIIETIDEELMNNIVSKYGTADISLLKQKLKDMRILDNVDLPAS
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Known secondary structure (DSSP)


S
TTSS

TS
SSSS
SS



 .........430.........440.........450.........460.........470.........480.........490
Sequence VAKLFIKELDPFAKYDPQFPRVVRMANLCVVGGHSVNGVAEIHSEIVKQDVFNSFYEMWPTKFQNKTNGV
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Known secondary structure (DSSP) GGGB

B
GGGS

TTS


S
SSTTS
GGG



B
 .........500.........510.........520.........530.........540.........550.........560
Sequence TPRRWIRFCNPELSTIISKWIGSDDWILNTDKLAGLKKFADDEDLQSEWRTAKRNNKMKVVSLIRDKTGY
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Known secondary structure (DSSP)
TTTT
S
SGGGTSGGGGGGGGGGSS


 .........570.........580.........590.........600.........610.........620.........630
Sequence IVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKEMSAKDRRKSFVPRVCIFGGKAFATYVQAKRIVK
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Known secondary structure (DSSP)


SSSS
B
TTTTTS





B
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence FITDVAATVNYDPDIGDLLKVVFVPDYNVSVAETLIPASELSQHISTAGMEASGTSNMKFAMNGCLLIGT
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Known secondary structure (DSSP) T
TTTGGGSS

GGG
S


TT

S

STT

 .........710.........720.........730.........740.........750.........760.........770
Sequence LDGANVEIREEVGEENFFLFGAHAPEIAGLRQERAEGKFVPDLRFEEVKEYVRSGVFGTSNYDELMGSLE
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Known secondary structure (DSSP) S
T
GGGS
S

GGGTT




TTTTSS


GGG
 .........780.........790.........800.........810.........820.........830.........840
Sequence GNEGYGRADYFLVGKDFPSYIECQEKVDEAYRDQKLWTRMSILNTAGSPKFSSDRTIHEYAKDIWDISPV
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Known secondary structure (DSSP) SSSSTT
TTTT

T
GGGBTT




 ...
Sequence IMP
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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