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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5lq6A_

Fold library idPDB HeaderMoleculeTitle
c5lq6A_1.48PDB header: immunosuppressantChain: A: PDB Molecule: virulence protein vsde;


Added to library: Thu Feb 9 12:22:42 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SSQDIISRINSKNINNNDSNEVKRIKDALSIELYPQNLSRDNLKQMARYVNNCVLLSACLHYNIHHRQDI
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Known secondary structure (DSSP)
T
S
S
GGG



SS



TS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LSSKLDSAIVDKIIFGHELNQSYSLNSIDEVEKEILNRYDIKRESSFIISAENYIAPIIGESRHDFNAVV
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Known secondary structure (DSSP)


SS


B


BS



TTT
 .........150.........160.........170.........180....
Sequence ISEYDKKPYVQFIDSWKTSNILPSLQEIKKHFSSSGEFYVRAYD
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Known secondary structure (DSSP)

TTS


TT
TT
SS

TT

S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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