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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5lj3W_ | 3.80 | PDB header: splicing | Chain: W: PDB Molecule: u2 small nuclear ribonucleoprotein a'; |
Added to library: Thu Feb 9 11:11:50 2017 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | M | K | F | T | P | S | I | V | I | D | A | P | Q | Y | Y | V | D | H | F | N | G | K | Y | N | V | D | K | C | V | I | L | R | D | L | Q | L | E | T | D | S | E | S | M | P | S | S | L | K | H | L | T | H | I | L | D | L | T | N | N | D | L | I | M | I | P | D | L | S | R | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | S | S | S | S | S | S | T | T | S | G | G | G | T | S | S | S | S | B | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | D | D | I | H | T | L | L | L | G | R | N | N | I | V | E | V | D | G | R | L | L | P | M | N | V | Q | N | L | T | L | S | N | N | S | I | R | R | F | E | D | L | Q | R | L | R | R | A | P | R | T | L | K | N | L | T | L | I | G | N | Q | V | C | H | L | A | N | Y | R | E | H |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | B | T | T | B | S | S | S | S | S | S | S | B | T | T | S | G | G | G | G | T | T | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | G | G | G | G | S | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Sequence | V | L | R | L | V | P | H | L | E | T | L | D | F | Q | N | V | T | A | E | E | R | K | S | A | ||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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