PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5ldeB_

Fold library id	PDB Header	Molecule	Title
c5ldeB_	3.38	PDB header: viral protein	Chain: B: PDB Molecule: immunoglobulin g-binding protein g,viral flice protein;

Links to external resources
Added to library: Sat Oct 7 08:20:04 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q Y K L I L G E T T T E A V D A A T A E K V F K Q Y A N D N G V D G E W T Y T K T F T V E L E V L G P L D P N S M A T Y E V L C E V A R K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G T D D R E V V L F L L N V F I P Q P T L A Q L I G A L R A L K E E G R L T F P L L A E C L F R A G R R D L L R D L L H L D P R F L E R H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S S
T T T
T
T S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A G T M S Y F S P Y Q L T V L H V D G E L C A R D I R S L I F L S K D T I T P Q T F L H W V Y C M E N L D L L G P T D V D A L M S M L R S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
S
G G G
S S T S S
T T T
T T

. . . . . . . . . 220 . . . . .

Sequence S R V D L Q R Q V Q T L M G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Y	K	L	I	L	G	E	T	T	T	E	A	V	D	A	A	T	A	E	K	V	F	K	Q	Y	A	N	D	N	G	V	D	G	E	W	T	Y	T	K	T	F	T	V	E	L	E	V	L	G	P	L	D	P	N	S	M	A	T	Y	E	V	L	C	E	V	A	R	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S																T						B																																T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	T	D	D	R	E	V	V	L	F	L	L	N	V	F	I	P	Q	P	T	L	A	Q	L	I	G	A	L	R	A	L	K	E	E	G	R	L	T	F	P	L	L	A	E	C	L	F	R	A	G	R	R	D	L	L	R	D	L	L	H	L	D	P	R	F	L	E	R	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S				S	S															T	T	T															T								T	S											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	T	M	S	Y	F	S	P	Y	Q	L	T	V	L	H	V	D	G	E	L	C	A	R	D	I	R	S	L	I	F	L	S	K	D	T	I	T	P	Q	T	F	L	H	W	V	Y	C	M	E	N	L	D	L	L	G	P	T	D	V	D	A	L	M	S	M	L	R	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			S	S														S													G	G	G				S	S												T	S	S		T	T	T										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	S	R	V	D	L	Q	R	Q	V	Q	T	L	M	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T