PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5l2dA_

Fold library id	PDB Header	Molecule	Title
c5l2dA_	2.66	PDB header: cell adhesion	Chain: A: PDB Molecule: surface-associated protein csha;

Links to external resources
Added to library: Thu Feb 9 16:56:17 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P M W V D F S D T A S M K N L D P Q G G F K V G T V F K K E I S P G Y V V T L T V T E L K P F N S T E I Y K K R V E G T P T A N T Y D P N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T S
T T S S B
T T
T T
G G G S T T S T T G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I N S Y L K G Y K D Y G K T P P S V T G R T Q I I L P D D A V N W G I K F K V E A T Y R G N P V K P S V V M A D G E D A N P A E Y G I F T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S T T T T S
B B
B
S S S
T T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N G E G W E Y V G E W M K G P Y T V M T E D M V K A F D K T R K D G L L I L K D K S V D W S K Y L S P D T V T G G L G S Q V F G P I I S A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T S S S
T T S
G G G T S
S
S S S S T T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	M	W	V	D	F	S	D	T	A	S	M	K	N	L	D	P	Q	G	G	F	K	V	G	T	V	F	K	K	E	I	S	P	G	Y	V	V	T	L	T	V	T	E	L	K	P	F	N	S	T	E	I	Y	K	K	R	V	E	G	T	P	T	A	N	T	Y	D	P	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T	T			S			T	T	S	S	B		T	T									T	T													G	G	G	S								T	T	S	T	T	G	G	G			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	N	S	Y	L	K	G	Y	K	D	Y	G	K	T	P	P	S	V	T	G	R	T	Q	I	I	L	P	D	D	A	V	N	W	G	I	K	F	K	V	E	A	T	Y	R	G	N	P	V	K	P	S	V	V	M	A	D	G	E	D	A	N	P	A	E	Y	G	I	F	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S				S	S	S	T	T	T	T	S					B	B						B			S	S	S														T	T												S	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	G	E	G	W	E	Y	V	G	E	W	M	K	G	P	Y	T	V	M	T	E	D	M	V	K	A	F	D	K	T	R	K	D	G	L	L	I	L	K	D	K	S	V	D	W	S	K	Y	L	S	P	D	T	V	T	G	G	L	G	S	Q	V	F	G	P	I	I	S	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S												S														T	T	S	S	S								T	T	S		G	G	G	T	S		S			S	S	S	S	T	T	S	S