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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5kojD_

Fold library idPDB HeaderMoleculeTitle
c5kojD_2.59PDB header: oxidoreductaseChain: D: PDB Molecule: nitrogenase femo beta subunit protein nifk;


Added to library: Thu Feb 9 11:33:03 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PQNVDKILDHAPLFREPEYQEMLAGKAKLENMPPADKVVEIADWTKSWEYREKNFARESLSVNPAKACQP
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Known secondary structure (DSSP)


TTS


TTSTS



TST
SS


S
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence LGAVFVASGFERTMSFVHGSQGCVAYYRSHLSRHFKEPSSAVSSSMTEDAAVFGGLNNMVDGLANTYKLY
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Known secondary structure (DSSP) TTBTTS
STS






TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DPKMIAVSTTCMAEVIGDDLHAFIQTAKGKGSVPEEFDVPFAHTPAFVGSHVTGYDNMLKGILEHFWKGR
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Known secondary structure (DSSP)

S
T

TTSS
TT
B

B



TTSS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TPVPNRSVNIIPGFDGFAVGNNRELKRILGMMGVQYTILSDVSDQFDTPSDGEYRMYDGGTKIEAARDAV
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Known secondary structure (DSSP)





S
TTT

SS

TTTTS


SS


S



B
GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence NADYTISLQEYCTPKTLEYCQSFGQKTASFHYPLGIGATDDLLQKLSEISGKPVPQELEMERGRLVDALA
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Known secondary structure (DSSP) GSBGGG
TTT

B


S




 .........360.........370.........380.........390.........400.........410.........420
Sequence DSQAYLHGKTYAIYGDPDFVYGMARFILETGGEPKHCLATNGSKAWEAQMQELFDSSPFGVGCKAWGGKD
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Known secondary structure (DSSP) GGGTTT
SSTT
TT

TSGGGTT
T

 .........430.........440.........450.........460.........470.........480.........490
Sequence LWHMRSLLATEKVDLLIGNSYGKYLERDTDTPLIRLMFPIFDRHHHHRFPVWGYQGALRVLVTLLDKIFD
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Known secondary structure (DSSP) S

S
GGG



SS


SSSSGGGS

S
 .........500.........510
Sequence KLDDDTIQAGVTDYSFDLTR
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Known secondary structure (DSSP) T
STTTTGGG

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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