PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5ko8B_

Fold library id	PDB Header	Molecule	Title
c5ko8B_	2.15	PDB header: oxidoreductase	Chain: B: PDB Molecule: nitroreductase;

Links to external resources
Added to library: Thu Feb 23 10:14:19 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A F I P Y A G A Q F E P E E M L S K S A E Y Y Q F M D H R R T V R E F S N R A I P L E V I E N I V M T A S T A P S G A H K Q P W T F V V V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
B
T T S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D P Q I K A K I R Q A A E K E E F E S Y N G R M S N E W L E D L Q P F G T D W H K P F L E I A P Y L I V V F R K A Y D V L P D G T Q R K N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S
T T T T T
S
T S S S
T T S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y V Q E S V G I A C G F L L A A I H Q A G L V A L T H T P S P M N F L Q K I L Q R P E N E R P F L L V P V G Y P A E G A M V P D L Q R K D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
B
S T T
T T
B
T T

. . . . . . . .

Sequence A A V M V V Y H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	F	I	P	Y	A	G	A	Q	F	E	P	E	E	M	L	S	K	S	A	E	Y	Y	Q	F	M	D	H	R	R	T	V	R	E	F	S	N	R	A	I	P	L	E	V	I	E	N	I	V	M	T	A	S	T	A	P	S	G	A	H	K	Q	P	W	T	F	V	V	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T							B																		T	T	S			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	P	Q	I	K	A	K	I	R	Q	A	A	E	K	E	E	F	E	S	Y	N	G	R	M	S	N	E	W	L	E	D	L	Q	P	F	G	T	D	W	H	K	P	F	L	E	I	A	P	Y	L	I	V	V	F	R	K	A	Y	D	V	L	P	D	G	T	Q	R	K	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T	T	S								T	T	T	T	T			S			T					S	S									S					T	T	S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	V	Q	E	S	V	G	I	A	C	G	F	L	L	A	A	I	H	Q	A	G	L	V	A	L	T	H	T	P	S	P	M	N	F	L	Q	K	I	L	Q	R	P	E	N	E	R	P	F	L	L	V	P	V	G	Y	P	A	E	G	A	M	V	P	D	L	Q	R	K	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																			T	T						B				S								T	T			T	T												B		T	T
	.	.	.	.	.	.	.	.
Sequence	A	A	V	M	V	V	Y	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)