PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5kmxA_

Fold library id	PDB Header	Molecule	Title
c5kmxA_	2.45	PDB header: membrane protein	Chain: A: PDB Molecule: putative uncharacterized protein tcil3000_10_9440;

Links to external resources
Added to library: Sat Jul 8 08:18:41 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P R D D F K E A V N A F N P N P I E K W T G R F N T E N A S V R R R T L N V P G F K S I P T V Y T E A T L P L N K D V T D G R L T V V V N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G G
T T
T T S
S S T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N T V Q P F T R R T P L R V K R E K W Y T C S S S C H R K H D E F R N K C I S E G G R Y T T E S S K C R L G E K C G Y C K Q N V Y L A T L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T B
S
T T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence L V A G S V G G G M Y R E S D K Y Q S A L Y P F Y D I S Q G Y E P R Q P S S V N V R L Y S E G D P F I A F Q Q L T E G R E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S
S S S S T T
T T
S S S
S T T
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	R	D	D	F	K	E	A	V	N	A	F	N	P	N	P	I	E	K	W	T	G	R	F	N	T	E	N	A	S	V	R	R	R	T	L	N	V	P	G	F	K	S	I	P	T	V	Y	T	E	A	T	L	P	L	N	K	D	V	T	D	G	R	L	T	V	V	V	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	G	G	G	G						T	T													T	T	S														S	S	T	T			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	T	V	Q	P	F	T	R	R	T	P	L	R	V	K	R	E	K	W	Y	T	C	S	S	S	C	H	R	K	H	D	E	F	R	N	K	C	I	S	E	G	G	R	Y	T	T	E	S	S	K	C	R	L	G	E	K	C	G	Y	C	K	Q	N	V	Y	L	A	T	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B									S																												T	T								S	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	L	V	A	G	S	V	G	G	G	M	Y	R	E	S	D	K	Y	Q	S	A	L	Y	P	F	Y	D	I	S	Q	G	Y	E	P	R	Q	P	S	S	V	N	V	R	L	Y	S	E	G	D	P	F	I	A	F	Q	Q	L	T	E	G	R	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T						S	S		S	S	S	S	T	T			T	T		S				S	S			S									T	T											S	S	S