Fold library entry viewer: c5khnB_

Added to library: Sat Jun 17 08:57:30 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	T	S	L	I	V	R	L	V	A	W	S	V	R	R	P	V	W	V	V	V	L	S	L	L	I	A	A	F	S	G	V	Y	V	A	R	H	F	K	I	N	T	D	I	S	K	L	V	D	A	E	P	Q	W	A	A	L	S	Q	A	V	D	R	A	F	P	Q	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T																														G	G	G	T	B																		G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	T	I	L	A	V	V	E	A	P	A	P	E	F	A	T	A	A	A	H	A	L	T	E	S	L	Q	K	Q	A	A	A	G	R	I	G	P	V	A	E	P	G	G	G	P	F	F	E	H	N	G	L	L	F	L	S	P	Q	Q	V	A	D	T	T	S	Q	L	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S																					T	T	S	S						S	S		S						S	G	G	G	G	S															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	P	L	V	N	E	L	A	K	N	P	S	L	T	G	L	A	T	T	L	S	T	T	L	G	Q	P	L	L	T	G	Q	V	K	L	P	S	M	A	K	L	L	S	R	S	A	A	T	V	D	D	V	L	A	G	K	P	A	A	F	S	W	R	A	L	V	D	N	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S														T					T	S	S		T	G	G	G																		S						S					T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	R	Q	P	A	R	A	F	V	T	V	Q	P	V	V	N	G	A	Q	T	S	D	V	I	R	E	T	A	R	A	L	D	L	E	K	R	Y	G	A	V	V	R	L	T	G	E	Q	P	L	A	D	D	E	F	S	S	V	E	D	G	A	A	L	N	G	V	V	T	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																											S							T								S													S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	V	F	V	I	L	W	L	A	L	R	S	K	R	M	I	A	S	V	L	V	T	L	F	V	G	L	V	V	T	A	A	L	G	L	A	M	V	G	S	L	N	M	I	S	V	A	F	M	V	L	F	V	G	L	G	V	D	F	S	I	Q	Y	G	V	K	Y	R	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S		S																															T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	F	R	G	E	A	I	D	A	A	L	I	G	A	A	H	S	M	G	M	P	L	A	L	A	T	T	A	V	A	A	S	F	F	S	F	I	P	T	A	Y	R	G	V	S	E	L	G	L	I	A	G	V	G	M	F	V	A	L	L	T	T	L	T	L	L	P	A	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T													T	T																	T	T	T	T	S	S	B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	L	F	A	P	P	G	F	P	W	L	A	P	V	D	D	Y	L	D	R	H	R	K	P	I	L	I	G	T	L	A	V	V	I	G	A	L	P	L	L	A	F	L	H	F	D	F	N	P	L	H	L	K	D	P	H	S	E	S	M	S	T	L	L	A	L	K	D	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T											T															T	S	G	G	G	G	G			B				S	S	T	T	S		T	T	S									T	T	S		T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	A	A	V	N	D	V	T	L	L	A	P	S	L	A	D	A	D	A	A	A	K	R	L	D	A	L	P	E	V	G	R	T	T	T	L	S	T	F	I	P	A	D	Q	P	E	K	R	A	A	I	A	T	A	A	S	T	L	L	P	A	L	T	Q	P	P	A	P	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T							S													T	T	S	T	T							S	G	G	G	S		T	T		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	D	A	Q	R	V	A	A	L	K	R	A	S	D	L	L	G	Y	A	A	E	D	H	P	G	P	G	A	A	A	A	Q	H	L	S	Q	S	L	A	K	L	A	A	A	D	S	A	T	R	D	R	A	E	R	A	F	A	D	T	L	R	I	A	L	N	Q	L	A	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S		S																	T	S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	Q	P	Q	E	I	T	R	D	T	L	P	P	P	L	V	R	D	W	V	A	P	D	G	K	A	L	V	Q	I	S	P	K	V	P	K	G	V	D	P	N	D	D	T	M	L	R	H	F	A	T	A	V	K	A	A	E	P	G	A	I	G	G	P	I	S	I	L	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							T	T	T	S							T	T	B		T	T	S												S	S	S		S	S																S	T	T				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	N	T	I	I	S	A	F	L	H	A	A	L	W	S	I	I	S	I	T	I	L	L	W	I	T	L	R	R	F	G	D	V	L	R	T	L	V	P	L	L	V	S	G	I	V	T	L	E	M	C	V	V	L	G	M	S	L	N	F	A	N	I	I	A	L	P	L	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										S	S		S																										T			B		T	T	G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	V	G	V	A	F	K	V	Y	F	V	M	A	W	R	A	G	Q	T	G	L	L	H	S	S	L	T	H	A	V	L	F	S	A	A	T	T	A	T	A	F	G	S	L	W	L	S	H	H	P	G	T	S	S	M	G	K	L	L	A	L	A	L	T	C	T	L	I	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	T	S	S	S								T	S																	T		S	S
	.	.	.	.	.	.	.	.
Sequence	V	V	F	Q	P	V	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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