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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5k8rA_

Fold library idPDB HeaderMoleculeTitle
c5k8rA_2.50PDB header: cell adhesionChain: A: PDB Molecule: protocadherin gamma-b3;


Added to library: Thu Feb 9 15:46:39 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKKFFTVSPENGNLLVSDRIDREEICGKKS
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Known secondary structure (DSSP)

SS

TT
TT

GGGT

SS


TTT

S


TTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTFSQNITELEISELALTGATFALESAQDPDVGVNSLQQY
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Known secondary structure (DSSP)

TTTT



S

B
S
STT

TT




B
S

GGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLSPDPHFSLIQKENLDGSRYPELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPP
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Known secondary structure (DSSP)


SS
TTS

S


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SSSSS








 .........220.........230.........240.........250.........260.........270.........280
Sequence VFTQDMYRVNVAENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFE
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Known secondary structure (DSSP) S
STT

TT




S
GGGT

S

TT
TTT

S


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ERDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDLDSGFNG
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Known secondary structure (DSSP) T
S
TT





S

STTTT

TT

SS
GGGT
 .........360.........370.........380.........390.........400.........410....
Sequence EILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPPLSSSKTITLHILD
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Known secondary structure (DSSP)
S

S
SSS
S


TTT


SSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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