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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5k8gA_

Fold library idPDB HeaderMoleculeTitle
c5k8gA_2.00PDB header: cell adhesionChain: A: PDB Molecule: antifreeze protein;


Added to library: Sat Sep 9 08:31:06 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATAGTVTVNAITSDDTIDGIELGQTISISGKAVGGDISVGDVVKMTINNTEYSTTVKAGGIWMIAGVLGS
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Known secondary structure (DSSP)





SSTTS
TTGGGSSTT

TT
TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLAADSEFDVVVTSSDAAGNKVQSIGTSTHSVDLSAEANFSLAEGQQHVLTNLPEGFGFPDGTTEVVTNF
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Known secondary structure (DSSP)


TT




TTS

S

TT



TT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGTITLGDDGEYRYDAPVRDHGDAVSDKDSVTVTLEDGRTFTVNLDIQDSAPVAVDDQDSIVVQHEEFEV
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Known secondary structure (DSSP) S

TTS





TTSSS


TTS




B




 .........220.........230.........240.........250.........260.........270.........280
Sequence SEIAASWVSYTHGESVTTFDGTSDLGGVDNDSAKDQIRWGNPAESKQSGYGFIDNDSNLEGRFDLNQDIS
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Known secondary structure (DSSP)



SS


BTTTB


SS
S

S
BSSSS

TTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VGTFTHYNYPVYSGGAITSAEMSVEFSVLDHLGVSTPVTLTVNFDHNETPNTNDVNASRDIVTVQNTHVT
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Known secondary structure (DSSP)

B
TT
S
TTS





S




 .........360.........370.........380.........390.........400.........410.........420
Sequence FERDGDIYTVQIVGFREVGNPDGEVVTSIYTNENAATSYELVVRVVEGDGYSLPSTEGNIFDDNGLGADS
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Known secondary structure (DSSP) TTTT
TTS

BS
TTTTSS

STTS
SSS


B
 .........430.........440.........450.........460.........470.........480.........490
Sequence LGADGSVTVVGVAVGAIVSSNESVGHSIEGQYGNLVLNSDGSYVYDVTASVSDIPAGATESFAYLIQDQD
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Known secondary structure (DSSP)
TTT


SS


S
S
TTS
SS
TTS
S
GGG

SS

TT
 .........500.........510.
Sequence GSTSSANLSINVGTNTASTPD
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Known secondary structure (DSSP) S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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