Fold library entry viewer: c5jouA_

Added to library: Thu Feb 9 12:32:14 2017
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	S	H	H	H	H	F	Q	G	P	A	S	N	K	V	Y	E	K	T	G	D	S	V	I	V	K	V	Q	H	K	E	T	G	G	P	R	L	V	R	L	Q	V	M	G	D	K	L	I	H	V	S	A	T	A	D	S	K	F	A	D	P	Q	S	L	I	V	V	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S		G	G	G	S	S					S	S							S	S			T	T	S		S									T	T								S	S	S	S							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	K	Q	T	S	F	A	V	V	Q	N	G	D	T	I	T	V	S	T	E	E	V	K	A	S	V	L	A	S	T	G	E	V	W	F	T	D	K	N	G	E	L	I	L	Q	E	N	K	G	G	G	K	T	F	T	P	I	E	V	E	G	T	K	G	Y	T	V	C	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S										T	T							S	S							T	T	T								T	T							B		T	T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	E	S	P	E	D	E	A	F	Y	G	L	G	Q	H	Q	A	D	E	F	N	Y	K	G	K	N	E	E	L	F	Q	Y	N	T	K	V	S	V	P	F	V	V	S	N	K	N	Y	G	I	L	L	D	S	Y	S	F	C	R	F	G	N	P	N	D	Y	S	Q	L	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T										S	S						T	T								B	T	T	B									T	T	T									S					S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	F	K	L	Y	D	K	T	G	Q	E	G	A	L	T	G	T	Y	V	P	K	K	G	E	T	L	V	R	R	E	D	S	I	Y	F	E	N	L	K	T	I	E	N	L	P	K	K	L	P	L	M	G	A	K	V	T	Y	E	G	E	I	E	P	A	Q	T	G	E	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		B	T									S	S	S								S						S	T	T	G	G	G	G	S		T	T				T	T												S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	I	L	Y	Y	A	G	Y	V	K	V	Y	L	N	N	E	P	V	V	P	E	R	W	R	T	A	W	N	P	N	S	Y	K	F	A	A	H	L	E	A	G	K	R	V	P	L	K	I	E	W	Q	P	D	G	G	Q	S	Y	C	G	L	R	A	L	T	P	V	N	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T											T	T	S												T	T													S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	Q	G	K	Q	S	W	W	S	E	M	T	K	Q	L	D	Y	Y	F	M	A	G	E	N	M	D	D	V	I	S	G	Y	R	S	L	T	G	K	S	P	V	M	P	K	W	A	M	G	F	W	Q	S	R	E	K	Y	N	T	Q	E	E	M	L	G	A	L	K	G	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S									S	S									S	S																				G	G	G	G	S						T	T			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	R	K	I	P	L	D	N	I	V	L	D	W	N	H	W	P	E	N	A	W	G	S	H	E	F	D	K	A	R	F	P	D	P	K	A	M	V	D	S	I	H	A	M	H	A	R	M	M	I	S	V	W	P	K	F	Y	V	T	T	E	H	F	K	E	F	D	E	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T										S			S		T	T		T	T	S					T	T	T		S												T	T									S				T	T	S									T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	W	M	Y	Q	Q	S	V	K	D	S	L	K	D	W	V	G	P	G	Y	H	Y	G	F	Y	D	A	Y	D	P	D	A	R	K	L	F	W	K	Q	M	Y	E	H	Y	Y	P	L	G	I	D	A	W	W	M	D	A	S	E	P	N	V	R	D	C	T	D	L	E	Y	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B							T	T		B		S	S	T	T			B				B		T	T	S															T	G	G	G	T									T	T	T		S	S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	L	C	G	P	T	A	L	G	S	S	T	E	F	F	N	A	Y	A	L	M	N	A	E	A	I	Y	D	G	Q	R	G	V	D	N	N	K	R	V	F	L	L	T	R	S	G	F	A	G	L	Q	R	Y	S	T	A	T	W	S	G	D	I	G	T	R	W	E	D	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			B	T	T	B		T	T	T	S		S																			T	T	B							S	S			T	T	G	G	G	G	S							S		B	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	Q	I	S	A	G	L	N	F	A	M	S	G	I	P	Y	W	T	M	D	I	G	G	F	C	V	E	N	R	Y	V	A	G	Q	K	Q	W	N	A	T	K	T	E	N	A	D	Y	K	E	W	R	E	L	N	T	R	W	Y	Q	F	G	A	F	V	P	L	Y	R	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T								B	T		S	B																																					T	T	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	Q	Y	P	F	R	E	I	W	E	I	A	P	E	G	H	P	A	Y	Q	S	V	V	Y	Y	T	K	L	R	Y	N	M	M	P	Y	I	Y	S	L	A	G	M	T	W	F	D	D	Y	T	I	M	R	P	L	V	M	D	F	T	A	D	A	E	V	N	D	I	G	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S			S					S		T	T	S																T														S				S									T	T		G	G	G	T	T			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	M	F	G	P	S	F	M	V	S	P	V	Y	R	Y	G	D	R	S	R	E	I	Y	F	P	Q	A	E	G	W	Y	D	F	Y	S	G	K	F	Q	A	G	G	E	R	K	V	I	E	A	P	Y	E	R	I	P	L	Y	V	R	A	G	A	I	I	P	F	G	D	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T								S	T	T		S								S	S	S					T	T	T						S	S									T	T								T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	Y	T	D	E	K	P	A	E	H	I	R	L	Y	I	Y	Q	G	A	D	G	E	F	T	L	Y	E	D	E	G	V	N	Y	N	Y	E	Q	G	M	Y	A	M	I	P	M	K	Y	D	E	A	T	K	T	L	V	I	G	E	R	Q	G	E	F	P	G	M	L	K	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	S	S												S	S											S	S	B	S	G	G	G	G	T											T	T	T	T								B				T	T			S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.
Sequence	T	F	T	V	V	T	V	N	K	E	K	A	Q	P	F	D	L	N	A	K	G	V	T	V	K	Y	N	G	S	E	Q	T	L	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	T	T	B						T	T									S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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