Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5jjvA_

Fold library idPDB HeaderMoleculeTitle
c5jjvA_2.40PDB header: recombinationChain: A: PDB Molecule: tyrosine recombinase xerh;


Added to library: Sat Feb 11 01:42:29 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKHPLEELKDPTENLLLWIGRFLRYKCTSLSNSQVKDQNKVFECLNELNQACSSSQLEKVCKKARNAGLL
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)

B
S

SS
S

TT
S
TTS

ST
G
 .........80.........90.........100.........110.........120.........130.........140
Sequence GINTYALPLLKFHEYFSKAFNSLKNIDEVMLAEFLSVYTGGLSLATKKNYRIALLGLFSYIDKQNQDENE
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) GG


SGGG

TTS
B

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSYIYNITLKNISGVNQSAGNKLPTHLNNEELEKFLESIDKIEMSAKVRARNRLLIKIIVFTGMRSNEAL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)









SSTT
STTSS







S


TTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence QLKIKDFTLENGCYTILIKGKGDKYRAVMLKAFHIESLLKEWLIERELYPVKNDLLFCNQKGSALTQAYL
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) T
BGGGTT
SSS
GGGTTTS


TTBSS

TTSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence YKQVERIINFAGLRREKNGAHMLRHSFATLLYQKRHDLILVQEALGHASLNTSRIYTHFDKQRLEEAASI
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TT


S

S

T
S
GGGGGG
GG
 ...
Sequence WEE
Predicted secondary structure

SS confidence


Known secondary structure (DSSP) GG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions