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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5j90B_

Fold library idPDB HeaderMoleculeTitle
c5j90B_1.39PDB header: chitin-binding proteinChain: B: PDB Molecule: ragb/susd domain protein;


Added to library: Sat Feb 11 11:18:51 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NHIKGGFAPMFNNIQVLTPEWVYQLQQGLNSDIWSGYMATPTGFESGVNNTTYALLDNWNGFIWDYGYKN
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Known secondary structure (DSSP)
TTGGGTBTTB
SSTTTTTSS



GGGG
SGGGT


 .........80.........90.........100.........110.........120.........130.........140
Sequence VMFNAYDIANKSKGKYDQFYALSLILKVEGMHRMTDTFGPIIYSKFGSNDATIAYDSQEEVYTQMFAELD
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Known secondary structure (DSSP) TTTTSSSB

TTTT

SSS


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence TAVAELTKRIDAGEASTFESTDMTGYKGKYESWVRFANTLRLRLAMRIVKVKPALAKTEAEKAVAQKFGV
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Known secondary structure (DSSP) TT


S
TTT

BSSTT
TTTT
STT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence MLVNDDSFKIVSPVYTNPIATISSSWLDIRMSADMESIMKGYQDPRIASYFDTSKQFPNEYKGVRTGIAI
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Known secondary structure (DSSP)

SGGG

SS


TTT


BTT
TTB


SSSTT



B
SS


 .........290.........300.........310.........320.........330.........340.........350
Sequence SGKSDHQDFSGIGAVVRSKEIYLMNAAEAYFLRAEGALRGWNMGGTAQELYEAGIKASFDQRGVSGAAGY
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Known secondary structure (DSSP) S
GGGTTTS

B
GGGSSS
TT


SS
T


 .........360.........370.........380.........390.........400.........410.........420
Sequence IADNTKTAAAYVDPNFPENNSDPVNNVTVAWDAAATNEVKLQKIITQKWIAGFPEGQEAWSDYRRTGYPK
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Known secondary structure (DSSP)
SS




B

TT
GGG
B






SS

TTS
TT


S
 .........430.........440.........450.........460.........470.........480..
Sequence LFPVLKNYSGGAITTEFGVRRINFVQSEKAGNSGGVATGVSKLGGPDNGGTRVWWDVNAPNF
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Known secondary structure (DSSP)



S


STTSS
TTT









S
SSTTS

TTS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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