PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5imuA_

Fold library id	PDB Header	Molecule	Title
c5imuA_	1.90	PDB header: signaling protein	Chain: A: PDB Molecule: tat (twin-arginine translocation) pathway signal sequence

Links to external resources
Added to library: Tue Mar 14 10:26:57 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A G A V S A R A A E Q Q R L Q R I V D A V A R Q E P R I S W A A G L R D D G T T T L L V T D L A G G W I P P H V R L P A N V T L L E P T A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S S
T T T T T
T T S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R R D A D V I D L L G A V V A V A A H E S N T Y V A E P G P D A P A L T G D R S A R S A I P K V D E F G P T L V E A V R R R D S L P R I A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
T T
T T S
S
T
S
T T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A I A L P A V R K T G V L E N E A E L L H G C I T A V K E S V L K A Y P S H E L T A V G D W M L L A A I E A L I D E Q D Y L A N Y H L A W Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T

. . . . . . .

Sequence A V T T R R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	G	A	V	S	A	R	A	A	E	Q	Q	R	L	Q	R	I	V	D	A	V	A	R	Q	E	P	R	I	S	W	A	A	G	L	R	D	D	G	T	T	T	L	L	V	T	D	L	A	G	G	W	I	P	P	H	V	R	L	P	A	N	V	T	L	L	E	P	T	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T	S								T	T	S	S							T	T	T	T	T				T	T	S				T	T						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	R	D	A	D	V	I	D	L	L	G	A	V	V	A	V	A	A	H	E	S	N	T	Y	V	A	E	P	G	P	D	A	P	A	L	T	G	D	R	S	A	R	S	A	I	P	K	V	D	E	F	G	P	T	L	V	E	A	V	R	R	R	D	S	L	P	R	I	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									S		S							T	T								T	T	S			S								T		S				T	T											T		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	A	L	P	A	V	R	K	T	G	V	L	E	N	E	A	E	L	L	H	G	C	I	T	A	V	K	E	S	V	L	K	A	Y	P	S	H	E	L	T	A	V	G	D	W	M	L	L	A	A	I	E	A	L	I	D	E	Q	D	Y	L	A	N	Y	H	L	A	W	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T																										T	T	S																				T	T
	.	.	.	.	.	.	.
Sequence	A	V	T	T	R	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S