PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5idjA_

Fold library id	PDB Header	Molecule	Title
c5idjA_	3.01	PDB header: transferase	Chain: A: PDB Molecule: cell cycle histidine kinase ccka;

Links to external resources
Added to library: Thu Feb 9 13:24:47 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L S Q A Q K M Q A I G Q L A G G V A H D F N N L L T A I Q L R L D Q L L H R H P V G D P S Y E G L N E I R Q T G V R A A D L V R K L L A F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R K Q T V Q R E V L D L G E L I S E F E V L L R R L L R E D V K L I T D Y G R D L P Q V R A D K S Q L E T A V M N L A V N A R D A V R A A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T S T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G G G V V R I R T A R L T R D E A I Q L G F P A A D G D T A F I E V S D D G P G I P P D V M G K I F D P F F T T K P V G E G T G L G L A T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
T T
S
S
T T S S S T T
S S
T T S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence Y G I V K Q S D G W I H V H S R P N E G A A F R I F L P V Y E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	S	Q	A	Q	K	M	Q	A	I	G	Q	L	A	G	G	V	A	H	D	F	N	N	L	L	T	A	I	Q	L	R	L	D	Q	L	L	H	R	H	P	V	G	D	P	S	Y	E	G	L	N	E	I	R	Q	T	G	V	R	A	A	D	L	V	R	K	L	L	A	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																																				S		T	T	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	K	Q	T	V	Q	R	E	V	L	D	L	G	E	L	I	S	E	F	E	V	L	L	R	R	L	L	R	E	D	V	K	L	I	T	D	Y	G	R	D	L	P	Q	V	R	A	D	K	S	Q	L	E	T	A	V	M	N	L	A	V	N	A	R	D	A	V	R	A	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S	S									S	S																										T	S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	G	V	V	R	I	R	T	A	R	L	T	R	D	E	A	I	Q	L	G	F	P	A	A	D	G	D	T	A	F	I	E	V	S	D	D	G	P	G	I	P	P	D	V	M	G	K	I	F	D	P	F	F	T	T	K	P	V	G	E	G	T	G	L	G	L	A	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																			T		T	T			S											S									T	T	S	S	S	T	T			S	S		T	T	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	Y	G	I	V	K	Q	S	D	G	W	I	H	V	H	S	R	P	N	E	G	A	A	F	R	I	F	L	P	V	Y	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T									S	S	S										B