PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5hxpA_

Fold library id	PDB Header	Molecule	Title
c5hxpA_	1.95	PDB header: transferase	Chain: A: PDB Molecule: (2z,6z)-farnesyl diphosphate synthase, chloroplastic;

Links to external resources
Added to library: Sat Apr 15 08:45:20 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L D E A L M P K H I A L I M D G N R R W A K D K G L D V S E G Y K H L F P K L K E I C D I S S K L G I Q V I T A F A F S T E N E V D F L M Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S
T
T T T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M F E E L Y D E F S R S G V R V S I I G C K T D L P M T L Q K C I A L T E E T T K G N K G L H L V I A L N Y G G Y Y D I L Q A T K S I V N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T S S
S
G G G S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A M N G L L D V E D I N K N L F D Q E L E S K C P N P D L L I R T G G D Q R V S N F L L W Q L A Y T E F Y F T K T L F P D F G E E D L K E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G
S S S S
S S
S
S S
T T S S T G G G T T
S S
G G G

. . . . . . . . . 220 . . . .

Sequence I I N F Q Q R H R R F G G H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	E	A	L	M	P	K	H	I	A	L	I	M	D	G	N	R	R	W	A	K	D	K	G	L	D	V	S	E	G	Y	K	H	L	F	P	K	L	K	E	I	C	D	I	S	S	K	L	G	I	Q	V	I	T	A	F	A	F	S	T	E	N	E	V	D	F	L	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G			S																	T								T	T																T											T	T			T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	F	E	E	L	Y	D	E	F	S	R	S	G	V	R	V	S	I	I	G	C	K	T	D	L	P	M	T	L	Q	K	C	I	A	L	T	E	E	T	T	K	G	N	K	G	L	H	L	V	I	A	L	N	Y	G	G	Y	Y	D	I	L	Q	A	T	K	S	I	V	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G						T	T	S	S							S		G	G	G	S																T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	M	N	G	L	L	D	V	E	D	I	N	K	N	L	F	D	Q	E	L	E	S	K	C	P	N	P	D	L	L	I	R	T	G	G	D	Q	R	V	S	N	F	L	L	W	Q	L	A	Y	T	E	F	Y	F	T	K	T	L	F	P	D	F	G	E	E	D	L	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S			G	G	G		S								S	S	S		S	S			S						S	S					T	T	S	S	T	G	G	G	T	T							S	S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	I	I	N	F	Q	Q	R	H	R	R	F	G	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S				T	T