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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5gmtB_

Fold library idPDB HeaderMoleculeTitle
c5gmtB_1.77PDB header: lyaseChain: B: PDB Molecule: alginate lyase;


Added to library: Thu Feb 9 17:44:35 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATTVWSLSSVPHSSHVSTILGHFKPIYHDWGDDSISTSTKHSSSRALRIFYEKGSYSKVHDHRGAGFYSR
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Known secondary structure (DSSP)




S
S
TGGG
S
GGG
SS
SS

TT
BTTB
S
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence PSAISSSVDAMILKYDVYFENFGFGIGGKLPGLFGGENGEGAYKCSGGSNPSSCFSLRLMWRKDGDGELY
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Known secondary structure (DSSP)
TTS
TT

S


TT
SSSGGGG

BTTB

TT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AYIPTNQESGFKDRDDVIAHSTYGQSLGRGKFRFMNNKWHSISEEVHINTVGKTDGWVKICVQAEGHSQQ
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Known secondary structure (DSSP)

S


TTGGG
TT

SSS


TT


TTS

TTS

 .........220.........230.........240.........250.........260.
Sequence CYTANHLRMRNTNSHHLRGMFFSTFFGGSEKSYAAPNDCYSYFKNFQILTP
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Known secondary structure (DSSP)


SSTT
B
SSSGGG

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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