PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5gjuA_

Fold library id	PDB Header	Molecule	Title
c5gjuA_	1.60	PDB header: hydrolase	Chain: A: PDB Molecule: atp-dependent rna helicase dead;

Links to external resources
Added to library: Sat Jun 3 08:38:08 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T F A D L G L K A P I L E A L N D L G Y E K P S P I Q A E C I P H L L N G R D V L G M A Q T G S G K T A A F S L P L L Q N L D P E L K A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G T
T
S
T T
T T S
T S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q I L V L A P T R E L A V Q V A E A M T D F S K H M R G V N V V A L Y V Q L R A L R Q G P Q I V V G T P G R L L D H L K R G T L D L S K L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T S T T
T
S
T S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence G L V L D E A D E M L R M G F I E D V E T I M A Q I P E G H Q T A L F S A T M P E A I R R I T R R F M K E P Q E V R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T S
S S
S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	F	A	D	L	G	L	K	A	P	I	L	E	A	L	N	D	L	G	Y	E	K	P	S	P	I	Q	A	E	C	I	P	H	L	L	N	G	R	D	V	L	G	M	A	Q	T	G	S	G	K	T	A	A	F	S	L	P	L	L	Q	N	L	D	P	E	L	K	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	G	G	G	T													T			S														T	T									T	T	S													T	S		T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	I	L	V	L	A	P	T	R	E	L	A	V	Q	V	A	E	A	M	T	D	F	S	K	H	M	R	G	V	N	V	V	A	L	Y	V	Q	L	R	A	L	R	Q	G	P	Q	I	V	V	G	T	P	G	R	L	L	D	H	L	K	R	G	T	L	D	L	S	K	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S															T	T	T	S	T	T															T			S																T	S	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	G	L	V	L	D	E	A	D	E	M	L	R	M	G	F	I	E	D	V	E	T	I	M	A	Q	I	P	E	G	H	Q	T	A	L	F	S	A	T	M	P	E	A	I	R	R	I	T	R	R	F	M	K	E	P	Q	E	V	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S							T	T											T	S		S	S								S	S														S	S