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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5gjqQ_

Fold library idPDB HeaderMoleculeTitle
c5gjqQ_4.50PDB header: hydrolaseChain: Q: PDB Molecule: 26s proteasome non-atpase regulatory subunit 11;


Added to library: Thu Feb 9 14:06:26 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence AAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLK
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Known secondary structure (DSSP)
SS

SS
S
STTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTK
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Known secondary structure (DSSP) TSS
TTTTTS


T
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLD
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Known secondary structure (DSSP)
STTT
TT
S


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence MQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAG
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Known secondary structure (DSSP) TTS
TTT
SST
S






TS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence RQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHIS
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Known secondary structure (DSSP) TTTT
STTTS
SSSSS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL
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Known secondary structure (DSSP) TS
TTSS
TTTT






 .
Sequence T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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