PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5gjqO_

Fold library id	PDB Header	Molecule	Title
c5gjqO_	4.50	PDB header: hydrolase	Chain: O: PDB Molecule: 26s proteasome non-atpase regulatory subunit 13;

Links to external resources
Added to library: Thu Feb 9 18:18:59 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D V P G F L Q Q S Q N S G P G Q P A V W H R L E E L Y T K K L W H Q L T L Q V L D F V Q D P C F A Q G D I K L Y E N F I S E F E H R V N P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T
T
T T
G G G S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L V E I I L H V V R Q M T D P N V A L T F L E K T R E K V K S S D E A V I L C K T A I G A L K L N I G D L Q V T K E T I E D V E E M L N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L P G V T S V H S R F Y D L S S K Y Y Q T I G N H A S Y Y K D A L R F L G C V D I K D L P V S E Q Q E R A F T L G L A G L L G E G V F N F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T
T
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E L L M H P V L E S L R N T D R Q W L I D T L Y A F N S G N V E R F Q T L K T A W G Q Q P D L A A N E A Q L L R K I Q L L C L M E M T F T R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T T T T T T T
T S S S G G G T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence P A N H R Q L T F E E I A K S A K I T V N E V E L L V M K A L S V G L V K G S I D E V D K R V H M T W V Q P R V L D L Q Q I K G M K D R L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
T T T T T S T T T T

. . . . . . . . . 360 . . . . . . . . . 370 . .

Sequence F W C T D V K S M E M L V E H Q A H D I L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	V	P	G	F	L	Q	Q	S	Q	N	S	G	P	G	Q	P	A	V	W	H	R	L	E	E	L	Y	T	K	K	L	W	H	Q	L	T	L	Q	V	L	D	F	V	Q	D	P	C	F	A	Q	G	D	I	K	L	Y	E	N	F	I	S	E	F	E	H	R	V	N	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S		T	T	T	T																															T		T	T												G	G	G	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	V	E	I	I	L	H	V	V	R	Q	M	T	D	P	N	V	A	L	T	F	L	E	K	T	R	E	K	V	K	S	S	D	E	A	V	I	L	C	K	T	A	I	G	A	L	K	L	N	I	G	D	L	Q	V	T	K	E	T	I	E	D	V	E	E	M	L	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	T	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	P	G	V	T	S	V	H	S	R	F	Y	D	L	S	S	K	Y	Y	Q	T	I	G	N	H	A	S	Y	Y	K	D	A	L	R	F	L	G	C	V	D	I	K	D	L	P	V	S	E	Q	Q	E	R	A	F	T	L	G	L	A	G	L	L	G	E	G	V	F	N	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			S																		T															T			S																							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	L	L	M	H	P	V	L	E	S	L	R	N	T	D	R	Q	W	L	I	D	T	L	Y	A	F	N	S	G	N	V	E	R	F	Q	T	L	K	T	A	W	G	Q	Q	P	D	L	A	A	N	E	A	Q	L	L	R	K	I	Q	L	L	C	L	M	E	M	T	F	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	T	T					T	T	T	T	T												T	T													T	S	S	S	G	G	G	T	T																				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	A	N	H	R	Q	L	T	F	E	E	I	A	K	S	A	K	I	T	V	N	E	V	E	L	L	V	M	K	A	L	S	V	G	L	V	K	G	S	I	D	E	V	D	K	R	V	H	M	T	W	V	Q	P	R	V	L	D	L	Q	Q	I	K	G	M	K	D	R	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S														T			T	T	T											T	T	S							T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Sequence	F	W	C	T	D	V	K	S	M	E	M	L	V	E	H	Q	A	H	D	I	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	T	T	T	T	S