PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5gj7A_

Fold library id	PDB Header	Molecule	Title
c5gj7A_	1.95	PDB header: oxidoreductase	Chain: A: PDB Molecule: acyl-coa dehydrogenase type 2 domain protein;

Links to external resources
Added to library: Sat Jul 8 08:46:54 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N A M Y D I Y G E A A L P A D V R E R L R I T R D L A Q A F H E R A P E H D R A G D F P F E N I E D L K A S G Y V R W T V P V E Y G G L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T S
T
T G G G T T S
G G G T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L S L E E M L M H Q E V L A K G D G S T A L A I G W H V G I L L H L R E T G A F P D E L F R M V C E S V V K E G A L I N S C A T E P P E T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A V K V P G G Y R I T G R K T F S T L S P A L T W I M V T A T V A D E D V V G Q F L V R K E D V E I V E T W D T L G M R A T G S H D I V L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T G G G
S T T T T G G G S
S S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D V F V P E E R V I V I Q R P G V Q A E R R P D G S G W L L H I P A C Y L G I A L A A R D F A L E Y A A T Y R P N T L P H P I A E V P H V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S S
S
S S
T T G G G G
T T
S S
G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence Q K L G E M E L K L L A A R T L L Y D L A R R F D A A S P E E R V K L Q P Q F G A V K T L A T N A A N Q V V D L A M R V V G G R S L S R A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
G G G G
T T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . .

Sequence P L E R Y Y R D V R A G L H N P P M D D V V Y R N L A K A A L A R R A A G Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G G T S S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	A	M	Y	D	I	Y	G	E	A	A	L	P	A	D	V	R	E	R	L	R	I	T	R	D	L	A	Q	A	F	H	E	R	A	P	E	H	D	R	A	G	D	F	P	F	E	N	I	E	D	L	K	A	S	G	Y	V	R	W	T	V	P	V	E	Y	G	G	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T						S	T	T	S																													T														T	G	G	G	T	T	S		G	G	G	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	L	E	E	M	L	M	H	Q	E	V	L	A	K	G	D	G	S	T	A	L	A	I	G	W	H	V	G	I	L	L	H	L	R	E	T	G	A	F	P	D	E	L	F	R	M	V	C	E	S	V	V	K	E	G	A	L	I	N	S	C	A	T	E	P	P	E	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	K	V	P	G	G	Y	R	I	T	G	R	K	T	F	S	T	L	S	P	A	L	T	W	I	M	V	T	A	T	V	A	D	E	D	V	V	G	Q	F	L	V	R	K	E	D	V	E	I	V	E	T	W	D	T	L	G	M	R	A	T	G	S	H	D	I	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												T	T	G	G	G		S									T	T	T	T									G	G	G	S									S	S		T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	V	F	V	P	E	E	R	V	I	V	I	Q	R	P	G	V	Q	A	E	R	R	P	D	G	S	G	W	L	L	H	I	P	A	C	Y	L	G	I	A	L	A	A	R	D	F	A	L	E	Y	A	A	T	Y	R	P	N	T	L	P	H	P	I	A	E	V	P	H	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G							S	S			S		S	S			T	T	G	G	G	G																											T	T		S	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	K	L	G	E	M	E	L	K	L	L	A	A	R	T	L	L	Y	D	L	A	R	R	F	D	A	A	S	P	E	E	R	V	K	L	Q	P	Q	F	G	A	V	K	T	L	A	T	N	A	A	N	Q	V	V	D	L	A	M	R	V	V	G	G	R	S	L	S	R	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T																												G	G	G	G		T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Sequence	P	L	E	R	Y	Y	R	D	V	R	A	G	L	H	N	P	P	M	D	D	V	V	Y	R	N	L	A	K	A	A	L	A	R	R	A	A	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									G	G	G	G	T	S	S	S																				T