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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5ghrC_

Fold library idPDB HeaderMoleculeTitle
c5ghrC_2.51PDB header: dna binding protein/replicationChain: C: PDB Molecule: ssdna-specific exonuclease;


Added to library: Thu Feb 9 14:25:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XDKEAFLERVREGAELIKXHIELGHTIRLISHRDADGITAGAILAKAVAREGGTFQLSIVKQVSEELIDQ
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Known secondary structure (DSSP)

TT

SSTT

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence LAREKREIYVFSDLGSGSIELIEEKLNFATVVVADHHPPEKDSFSTDSHVLVNPVPFGANSVRDLSGSGV
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Known secondary structure (DSSP) T
SS

GGGSTTS

S

SSSS
SSTT
SGGGT

TTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence AYFVAREXNRKNRDXAYVAIVGAVGDXQEIDGTFHGLNLEIIEDGKELGILEVRKELRLFGRESRPLYQX
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Known secondary structure (DSSP)
GGGGGGTTTTTTSS

TTTTS


S
TTTSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAYATNPEIPEITGDERKAIEWLRAKGFDPEXKYWQLREEEKRKLHEALLVHXIKHGAPKEAIDRLIGDV
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Known secondary structure (DSSP) T

SS

TTTTTTSTT

TTSBGGGS
TT

TT
 .........290.........300.........310.........320.........330.........340....
Sequence VISPLYPEGDVRHEAREFATLLNATGRLNAGTLGVAICLGDEEAYKVARKXLDDYKKEQIEARK
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Known secondary structure (DSSP)
TTS
TTSGGGBTT
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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London
Michael Sternberg

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