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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5g52A_ | 3.80 | PDB header: virus | Chain: A: PDB Molecule: vp1; |
Added to library: Sat Mar 25 08:55:05 2017 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | E | E | S | R | N | T | T | V | L | D | T | T | T | T | L | Q | S | S | G | F | G | R | A | F | F | G | E | A | F | N | D | L | K | T | L | M | R | R | Y | Q | L | Y | G | Q | L | L | L | S | V | T | T | D | K | D | I | D | H | C | M | F | T | F | P | C | L | P | Q | G | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | S | T | T | T | T | T | T | S | S | T | T | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | L | D | I | G | S | A | G | S | P | H | E | I | F | N | R | C | R | D | G | I | I | P | L | I | A | S | G | Y | R | F | Y | R | G | D | L | R | Y | K | I | V | F | P | S | N | V | N | S | N | I | W | V | Q | H | R | P | D | R | R | L | E | G | W | S | A | A | K | I | V | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | G | G | G | T | T | T | T | S | S | ![]() | ![]() | ![]() | ![]() | G | G | G | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | S | B |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | C | D | A | V | S | T | G | Q | G | V | Y | N | H | G | Y | A | S | H | I | Q | I | T | R | V | N | N | V | I | E | L | E | V | P | F | Y | N | A | T | C | Y | N | Y | L | Q | A | F | N | A | S | S | A | A | S | S | Y | A | V | S | L | G | E | I | S | V | G | F | V | N | K | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | S | T | T | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | T | S | ![]() | ![]() | ![]() | S | S | S | B | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Sequence | V | T | I | Y | Y | S | I | G | D | G | M | Q | F | S | Q | W | V | G | Y | Q | P | M | M | I | L | D | Q | L | P | A | P | V | V | |||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | B | G | G | G | S |
Download: | PDB structure | FASTA sequence |
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