PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5eikA_

Fold library id	PDB Header	Molecule	Title
c5eikA_	2.30	PDB header: membrane protein	Chain: A: PDB Molecule: uncharacterized protein y57a10a.28;

Links to external resources
Added to library: Thu Feb 9 15:31:54 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I D H D T L I D A G G Y V Q K L K L Y P Y F D A A H Y V L T C L S V R H D L G P D A I S F S R K H P F S C W L S C M L M S F A G S F L S C F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L L G E P I I S P L K Q H A D I L L G S I V W Y L V F Y S P F D V V F R L A T W F P V K L G L S V L K E V Q R T H K I A A G V K H A V R I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T G G G G
S G G G T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P E S Y L V Q I L V G V A K G A G S G V V K I V E Q L A R G T W H P T N H E I L R P S F T T K A C V I A S I V F T L E R H S M Y V T A P H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
T T S S
T T S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . .

Sequence L V Y L C V V G F F I Y F K L A S L C L S V H D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	D	H	D	T	L	I	D	A	G	G	Y	V	Q	K	L	K	L	Y	P	Y	F	D	A	A	H	Y	V	L	T	C	L	S	V	R	H	D	L	G	P	D	A	I	S	F	S	R	K	H	P	F	S	C	W	L	S	C	M	L	M	S	F	A	G	S	F	L	S	C	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T																				T	T																					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	G	E	P	I	I	S	P	L	K	Q	H	A	D	I	L	L	G	S	I	V	W	Y	L	V	F	Y	S	P	F	D	V	V	F	R	L	A	T	W	F	P	V	K	L	G	L	S	V	L	K	E	V	Q	R	T	H	K	I	A	A	G	V	K	H	A	V	R	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			T	T	G	G	G	G																		S	G	G	G							T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	E	S	Y	L	V	Q	I	L	V	G	V	A	K	G	A	G	S	G	V	V	K	I	V	E	Q	L	A	R	G	T	W	H	P	T	N	H	E	I	L	R	P	S	F	T	T	K	A	C	V	I	A	S	I	V	F	T	L	E	R	H	S	M	Y	V	T	A	P	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T															T												T	T						T	T	S	S																						T	T	S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Sequence	L	V	Y	L	C	V	V	G	F	F	I	Y	F	K	L	A	S	L	C	L	S	V	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S