PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5czrC_

Fold library id	PDB Header	Molecule	Title
c5czrC_	2.30	PDB header: cell adhesion	Chain: C: PDB Molecule: cadherin-related family member 2;

Links to external resources
Added to library: Fri Feb 10 00:17:36 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N V A P K F L A N M T S V I L P E D L P V G A Q A F W L V A E D Q D N D P L T Y G M S G P N A Y F F A V T P K T G E V K L A S A L D Y E T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T T
T T S
T T
S T T G G G
T T T
S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y T F K V T I S V S D P Y I Q V Q R E M L V I V E D R N D N A P V F Q N T A F S T S I N E T L P V G S V V F S V L A V D K D M G S A G M V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
T T
T T
S S G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y S I E K V I P S T G D S E H L F R I L A N G S I V L N G S L S Y N N K S A F Y Q L E L K A C D L G G M Y H N T F T I Q C S L P V F L S I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T G G G T
T T S
S
T T T T
S
T T
B

. . . . . .

Sequence V V D Q P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	V	A	P	K	F	L	A	N	M	T	S	V	I	L	P	E	D	L	P	V	G	A	Q	A	F	W	L	V	A	E	D	Q	D	N	D	P	L	T	Y	G	M	S	G	P	N	A	Y	F	F	A	V	T	P	K	T	G	E	V	K	L	A	S	A	L	D	Y	E	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	G						T	T			T	T	S										T	T										S	T	T	G	G	G					T	T	T							S				T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	T	F	K	V	T	I	S	V	S	D	P	Y	I	Q	V	Q	R	E	M	L	V	I	V	E	D	R	N	D	N	A	P	V	F	Q	N	T	A	F	S	T	S	I	N	E	T	L	P	V	G	S	V	V	F	S	V	L	A	V	D	K	D	M	G	S	A	G	M	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S	S															S																	T	T			T	T												S	S	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	S	I	E	K	V	I	P	S	T	G	D	S	E	H	L	F	R	I	L	A	N	G	S	I	V	L	N	G	S	L	S	Y	N	N	K	S	A	F	Y	Q	L	E	L	K	A	C	D	L	G	G	M	Y	H	N	T	F	T	I	Q	C	S	L	P	V	F	L	S	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			T	T	G	G	G	T					T	T	S						S				T	T	T	T		S																T	T						B
	.	.	.	.	.	.
Sequence	V	V	D	Q	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)