PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4db9A_

Fold library id	PDB Header	Molecule	Title
c4db9A_	PDB header: de novo protein	Chain: A: PDB Molecule: armadillo repeat protein, yiiim3aiii;	PDBTitle: designed armadillo-repeat protein

Links to external resources
Added to library: Sat May 19 12:57:30 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H H H H G S E L P Q M V Q Q L N S P D Q Q E L Q S A L R K L S Q I A S G G N E Q I Q A V I D A G A L P A L V Q L L S S P N E Q I L Q E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G G G G
S
T S
T T G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W A L S N I A S G G N E Q I Q A V I D A G A L P A L V Q L L S S P N E Q I L Q E A L W A L S N I A S G G N E Q I Q A V I D A G A L P A L V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T T
S
T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence L L S S P N E Q I L Q E A L W A L S N I A S G G N E Q K Q A V K E A G A E P A L E Q L Q S S P N E K I Q K E A Q E A L E K I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T S
T T T T
S S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	H	H	H	G	S	E	L	P	Q	M	V	Q	Q	L	N	S	P	D	Q	Q	E	L	Q	S	A	L	R	K	L	S	Q	I	A	S	G	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q	L	L	S	S	P	N	E	Q	I	L	Q	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		G	G	G							G	G	G		S																	T	S											T	T								G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	A	L	S	N	I	A	S	G	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q	L	L	S	S	P	N	E	Q	I	L	Q	E	A	L	W	A	L	S	N	I	A	S	G	G	N	E	Q	I	Q	A	V	I	D	A	G	A	L	P	A	L	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S											T	T									T	T		S																T	T	S											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	L	L	S	S	P	N	E	Q	I	L	Q	E	A	L	W	A	L	S	N	I	A	S	G	G	N	E	Q	K	Q	A	V	K	E	A	G	A	E	P	A	L	E	Q	L	Q	S	S	P	N	E	K	I	Q	K	E	A	Q	E	A	L	E	K	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S																	T	S											T	T									T	T		S	S														T