PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qk1A_

Fold library id	PDB Header	Molecule	Title
c2qk1A_	PDB header: protein binding	Chain: A: PDB Molecule: protein stu2;	PDBTitle: structural basis of microtubule plus end tracking by2 xmap215, clip-170 and eb1

Links to external resources
Added to library: Tue Mar 16 12:06:39 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S H X A S X L P E E T I L D K L P K D F Q E R I T S S K W K D R V E A L E E F W D S V L S Q T K K L K S T S Q N Y S N L L G I Y G H I I Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
G G G S
T T T
S S T G G G
B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D A N I Q A V A L A A Q S V E L I C D K L K T P G F S K D Y V S L V F T P L L D R T K E K K P S V I E A I R K A L L T I C K Y Y D P L A S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S
G G G
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G R N E D X L K D I L E H X K H K T P Q I R X E C T Q L F N A S X K E E K D G Y S T L Q R Y L K D E V V P I V I Q I V N D T Q P A I R T I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S S
S
S T T T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence F E S F A I L I K I F G X N T F V K T L E H L D N L K R K K I E E T V K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	X	A	S	X	L	P	E	E	T	I	L	D	K	L	P	K	D	F	Q	E	R	I	T	S	S	K	W	K	D	R	V	E	A	L	E	E	F	W	D	S	V	L	S	Q	T	K	K	L	K	S	T	S	Q	N	Y	S	N	L	L	G	I	Y	G	H	I	I	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							B			G	G	G	S		T	T						T		S	S															T	G	G	G				B			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	A	N	I	Q	A	V	A	L	A	A	Q	S	V	E	L	I	C	D	K	L	K	T	P	G	F	S	K	D	Y	V	S	L	V	F	T	P	L	L	D	R	T	K	E	K	K	P	S	V	I	E	A	I	R	K	A	L	L	T	I	C	K	Y	Y	D	P	L	A	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																					T	T	T	S															G	G	G																					S		T	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	R	N	E	D	X	L	K	D	I	L	E	H	X	K	H	K	T	P	Q	I	R	X	E	C	T	Q	L	F	N	A	S	X	K	E	E	K	D	G	Y	S	T	L	Q	R	Y	L	K	D	E	V	V	P	I	V	I	Q	I	V	N	D	T	Q	P	A	I	R	T	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	T		S	S																				S		S								T	T	T										T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	F	E	S	F	A	I	L	I	K	I	F	G	X	N	T	F	V	K	T	L	E	H	L	D	N	L	K	R	K	K	I	E	E	T	V	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	G	G	G							S