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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2kxnB_ | PDB header: rna binding protein/rna | Chain: B: PDB Molecule: transformer-2 protein homolog beta; | PDBTitle: nmr structure of human tra2beta1 rrm in complex with aagaac rna |
Added to library: Sat Mar 19 09:04:59 2011 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | R | H | V | G | N | R | A | N | P | D | P | N | C | C | L | G | V | F | G | L | S | L | Y | T | T | E | R | D | L | R | E | V | F | S | K | Y | G | P | I | A | D | V | S | I | V | Y | D | Q | Q | S | R | R | S | R | G | F | A | F | V | Y | F | E | N | V | D | D | A | K | E | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | B | ![]() | ![]() | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Sequence | K | E | R | A | N | G | M | E | L | D | G | R | R | I | R | V | D | F | S | I | T | K | R | P | H | |||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | ![]() | ![]() | S | S | S | S | S |
Download: | PDB structure | FASTA sequence |
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