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SuSPect Package

An SQLite database containing pre-calculated SuSPect scores for all possible mutations to all human proteins in UniProt (2013_03), with a Perl script for querying DownloadREADME

Training Data

September 2011 version of Humsavar, used as the training set. SAVsScaled Features

SuSPect SVMs

SuSPect-All, consisting of 67 features (see README for details) SVMREADME
SuSPect-FS, consisting of 9 features (see README for details) SVMREADME
Scaling Parameters, suitable for use with both methods Download

VariBench Results

Predictions from multiple methods on the VariBench test set. Download

Contact

Chris Yates

Structural Bioinformatics Group, Imperial College London