Fold library entry viewer: d3cmsa_

Added to library: Tue Mar 16 13:55:56 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	E	V	A	S	V	P	L	T	N	Y	L	D	S	Q	Y	F	G	K	I	Y	L	G	T	P	P	Q	E	F	T	V	L	F	D	T	G	S	S	D	F	W	V	P	S	I	Y	C	K	S	N	A	C	K	N	H	Q	R	F	D	P	R	K	S	S	T	F	Q	N	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T									T	T	T	T									T	T								B	T	T			S					T	S			B		G	G	G		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	P	L	S	I	H	Y	G	T	G	S	M	Q	G	I	L	G	Y	D	T	V	T	V	S	N	I	V	D	I	Q	Q	T	V	G	L	S	T	Q	E	P	G	D	F	F	T	Y	A	E	F	D	G	I	L	G	M	A	Y	P	S	L	A	S	E	Y	S	I	P	V	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T															T	T																S						S	S		S						S		G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	M	M	N	R	H	L	V	A	Q	D	L	F	S	V	Y	M	D	R	N	G	Q	E	S	M	L	T	L	G	A	I	D	P	S	Y	Y	T	G	S	L	H	W	V	P	V	T	V	Q	Q	Y	W	Q	F	T	V	D	S	V	T	I	S	G	V	V	V	A	C	E	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S	S	S								T	T	S	S							S				G	G	G											S	S	B	T	T	B										T	T					S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	Q	A	I	L	D	T	G	T	S	K	L	V	G	P	S	S	D	I	L	N	I	Q	Q	A	I	G	A	T	Q	N	Q	Y	G	E	F	D	I	D	C	D	N	L	S	Y	M	P	T	V	V	F	E	I	N	G	K	M	Y	P	L	T	P	S	A	Y	T	S	Q	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S																T					T	T	T						T	T		T	T	T	S								T	T															T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Sequence	G	F	C	T	S	G	F	Q	S	E	Q	K	W	I	L	G	D	V	F	I	R	E	Y	Y	S	V	F	D	R	A	N	N	L	V	G	L	A	K	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S															T	T							T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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