Fold library entry viewer: d3ckca1

Added to library: Tue Mar 16 13:01:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	D	Q	Q	G	V	F	V	K	G	Y	A	M	L	G	V	T	G	D	G	Q	D	E	G	E	S	G	F	Y	R	T	T	F	N	C	N	E	L	P	T	D	E	C	L	W	A	W	Q	K	N	Q	D	I	P	Q	L	T	S	I	S	W	S	P	S	S	Q	R	T	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	B					S		T	T	T	T												T	T	S	S	S				S		T	T	S	T	T							T				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Y	V	R	L	G	Y	D	I	T	Q	Y	N	F	F	L	D	Q	T	E	G	M	T	D	A	E	T	L	R	Q	R	A	E	I	R	F	L	R	A	L	H	Y	W	Y	F	L	D	L	F	G	K	A	P	F	K	E	H	F	S	N	D	L	P	V	E	K	K	G	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	T	T			S																										S						S	S		S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	Y	T	Y	I	Q	N	E	L	N	E	I	E	A	D	M	Y	E	P	R	Q	A	P	F	G	R	A	D	K	A	A	N	W	L	L	R	A	R	L	Y	L	N	A	G	V	Y	T	G	Q	T	D	Y	A	K	A	E	E	Y	A	S	K	V	I	G	S	A	Y	K	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G	S			T	T		S		T	T	S																T						S	S															T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	N	Y	S	E	L	F	M	A	D	N	D	E	N	E	N	A	M	Q	E	I	I	L	P	I	R	Q	D	G	V	K	T	R	N	Y	G	G	S	T	Y	L	V	C	G	T	R	V	A	G	M	P	R	M	G	T	T	N	G	W	S	I	F	A	R	A	A	M	V	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	G	G	G	G	G	S	T	T	T	T	T						T	T													G	G	G	B								T	T			T	T		T	T		S	S	S													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	F	S	N	L	E	D	V	P	M	L	P	A	D	V	E	I	P	T	K	G	L	D	T	D	E	Q	I	D	A	F	D	A	E	H	G	I	R	T	E	D	M	I	K	A	A	G	D	D	R	A	L	L	Y	S	G	V	G	G	G	R	R	K	I	Q	T	D	A	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S	G	G	G	S					T	T	S				S	S	S			S											T	T		S									T		T	T						S	S	T	T	S				S	S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	F	T	D	G	L	S	I	V	K	W	Q	N	Y	R	S	D	G	K	P	V	S	H	A	T	Y	P	D	T	D	I	P	L	F	R	L	A	E	A	Y	L	T	R	A	E	A	I	F	R	Q	G	G	D	A	T	G	D	I	N	E	L	R	K	R	A	N	C	T	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G	S						S		S	S		T	T					S		S	S	S										T														T	T														T	T		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	Q	T	V	T	E	Q	E	L	I	D	E	W	A	R	E	F	Y	L	E	G	R	R	R	S	D	L	V	R	F	G	M	F	T	T	N	K	Y	L	W	D	W	K	G	G	A	M	N	G	T	S	V	A	S	Y	Y	N	K	Y	P	I	P	V	S	D	I	N	N	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S															T	T	S	S									T	T		S	S	S	T	T				T	T	G	G	G		T	T						G	G	G	G	S												T
	.	.	.	.	.	.	.	.	.
Sequence	N	M	S	Q	N	E	G	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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